Pairwise Alignments

Query, 288 a.a., flagellar motor protein MotA from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 265 a.a., MotA/TolQ/ExbB proton channel (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  260 bits (665), Expect = 2e-74
 Identities = 136/262 (51%), Positives = 182/262 (69%), Gaps = 2/262 (0%)

Query: 17  KNSPVGSVFASIVIPIALIACVLIYLFVLGNPANFEGGNTENHPLPGNYLGVVYKGGWVV 76
           K+  VG   A IVI    I  V I+ F+LGNP+NF   +  NHPL  N LG +YKGG +V
Sbjct: 6   KSQIVGIKNAGIVIICCFIVAVCIFQFLLGNPSNFMNNDPNNHPL--NMLGTIYKGGVIV 63

Query: 77  PVLMSLNLMVFIFAIERALTIGKAKGTKNVAQFVRSISAKLNQRDINGAIASCDAQKGSV 136
           PV+ +L L V   +IER   +  A G  ++A+FV +I   L   D+  A   CD Q+GSV
Sbjct: 64  PVIQTLLLTVLALSIERFFALRSAFGKGSLAKFVANIKEALAAGDLKKAQEICDKQRGSV 123

Query: 137 GNVVKAGLLKYKEMQNEPELLKAEKVAAIQKEIEESTALELPMLEKNLVVISTIASISTL 196
            NVV A L KY+EM+    L K +K+ AIQKE+EE+TALE+PM+++NL +I+TI ++ TL
Sbjct: 124 ANVVTATLRKYEEMEKNTALPKEQKLLAIQKELEEATALEMPMMQQNLPIIATITTLGTL 183

Query: 197 VGLIGTVLGMIKAFAALATSGSPDSVALANGISEALINTALGITGSTIAIIAYNYFTSKI 256
           +GL+GTV+GMI++FAAL+  G  DS+AL+ GISEALINTA GI    +A+I+YNYFT+KI
Sbjct: 184 MGLLGTVIGMIRSFAALSAGGGADSMALSQGISEALINTAFGILTGALAVISYNYFTNKI 243

Query: 257 DELTYSIDEAGFSMVSTFTAQH 278
           D+LTY +DE GFS+V TF A H
Sbjct: 244 DKLTYGLDEVGFSIVQTFAATH 265