Pairwise Alignments

Query, 437 a.a., ribosome biogenesis GTPase Der from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 708 a.a., ribosome biogenesis GTPase Der from Bifidobacterium breve UCC2003

 Score =  279 bits (714), Expect = 2e-79
 Identities = 160/434 (36%), Positives = 259/434 (59%), Gaps = 15/434 (3%)

Query: 5   IIAIVGRPNVGKSTLFNRLIGQRKAIMDNVSGVTRDRSYGHGDWTGKYYTVIDTGGYVHG 64
           ++AIVGRPNVGKS+L NR++G+R A++++  GVTRDR     +W G  + ++DTGG+   
Sbjct: 274 VLAIVGRPNVGKSSLVNRILGRRAAVVEDTPGVTRDRVSYDAEWAGTDFKLVDTGGWEAD 333

Query: 65  SEDIFESEINRQVELAMNEADVILFMVDVDAGLTGLDEEFANVLRRTDKPVYVVANKADT 124
            E I ES I  Q ++A+  AD ++F+VD   G+T  DE    +LR + KPV +  NK D 
Sbjct: 334 VEGI-ESAIASQAQVAVTLADAVVFVVDGQVGMTTTDERIVKMLRASGKPVVLAVNKIDD 392

Query: 125 NARMHQMGEFYALGVGIDIYPISSQSGSGTGELLDEVVKHFKD----EGVEDPDAGIPKI 180
           NA  +   EF+ LG+G + Y IS+  G G G+LLD  +   K+     G   P +G+ ++
Sbjct: 393 NASEYLAAEFWKLGLG-EPYSISAMHGRGVGDLLDVALGKLKEAEKASGYLTP-SGLRRV 450

Query: 181 AVLGRPNVGKSSFVNLLLGEERNIVTDRAGTTRDAIHARYNAFGKEFIIVDTAGLRRKSK 240
           A++GRPNVGKSS +N L   ER +V D AGTTRD +    +  G++++ +DTAG++R+  
Sbjct: 451 ALVGRPNVGKSSLLNQLAHSERAVVNDLAGTTRDPVDEIVDIDGEDWLFIDTAGIKRRQH 510

Query: 241 VSEDIEFYSVLRSVRALEDADVCIVILDATRGIEAQDVNIIALAEKNRKGIVILVNKWDL 300
                E+YS LR+  A+E +++ +++ DA++ I  QD+ +++ A    + IV++ NKWD 
Sbjct: 511 KLTGAEYYSSLRTQAAIERSELALILFDASQPISDQDLKVMSTAVDAGRAIVLVFNKWDA 570

Query: 301 VEK-DTHTTKQFEDEIYNRIAPISYVPIIFTSVVTKQRIHKAIEVAMEVYDNKTKKIPTS 359
           +++ D    ++  +  ++R+     V +   +     R+ +A+  A+E +D   ++IPT 
Sbjct: 571 MDEFDKQRLERLWNTEFDRVMWAERVNLSAKTGWHTNRLARAMNTALESWD---QRIPTG 627

Query: 360 KLNDAMLPEIE-RYPPPAIKGKFVKIKYITQLPTHNPTFAFFCNLPQYVKESYVRYLENR 418
           KLN A L  I+  +P P   GK  +I + TQ  T  P F  F     +++  Y RY+E +
Sbjct: 628 KLN-AFLGRIQAAHPHPLRGGKQPRILFATQASTRPPRFVIFAT--GFLEHGYRRYIERQ 684

Query: 419 MREHFGFTGVPIKL 432
           +RE FGF G PI++
Sbjct: 685 LREEFGFEGTPIQI 698



 Score = 71.2 bits (173), Expect = 1e-16
 Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 3/135 (2%)

Query: 165 FKDEGVEDPDAGIPKIAVLGRPNVGKSSFVNLLLGEERNIVTDRAGTTRDAIHARYNAFG 224
           F+D   +     +  +A++GRPNVGKSS VN +LG    +V D  G TRD +       G
Sbjct: 260 FEDGARKSGPKPVGVLAIVGRPNVGKSSLVNRILGRRAAVVEDTPGVTRDRVSYDAEWAG 319

Query: 225 KEFIIVDTAGLRRKSKVSEDIEFYSVLRSVRALEDADVCIVILDATRGIEAQDVNIIALA 284
            +F +VDT G        E IE     ++  A+  AD  + ++D   G+   D  I+ + 
Sbjct: 320 TDFKLVDTGGWEAD---VEGIESAIASQAQVAVTLADAVVFVVDGQVGMTTTDERIVKML 376

Query: 285 EKNRKGIVILVNKWD 299
             + K +V+ VNK D
Sbjct: 377 RASGKPVVLAVNKID 391