Pairwise Alignments

Query, 514 a.a., PAS domain-containing sensor histidine kinase from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 778 a.a., PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score =  215 bits (547), Expect = 5e-60
 Identities = 153/506 (30%), Positives = 253/506 (50%), Gaps = 27/506 (5%)

Query: 15  QSRLKAIIETAVDGIITIDTEGRMESANPAAARIFGYEPEEMIGRNVHMLMPEPDHGLHD 74
           + RL  I++T VDGI+ ID  G +ES NPAA R+FGY  EE++G +++ L+P  + G HD
Sbjct: 280 EQRLDGIMKTVVDGIVVIDENGIIESFNPAAERLFGYRAEEVVGASINRLIPGGESGRHD 339

Query: 75  GYIKRYMQTGEGQIIGKGREVLGKKKDGSLFPFFLSIAEVKLQDKIIFTGIVHDISDLKK 134
             ++RY+QTG+  IIG+GRE L  ++DGSL P  L+I+E++L D+ IFTG+V DIS  K+
Sbjct: 340 RSLRRYLQTGQAGIIGRGREELALRRDGSLLPVELAISELRLDDRRIFTGLVRDISARKE 399

Query: 135 TEEALRESESKINSIIQTAVDGIITIDRRGVMEMVNPAAARLFEYEEHELIGRKINMLMP 194
            +  LRE+E +    I    + I+  D        +     +   +  +L      + + 
Sbjct: 400 ADRQLRENEERYALAIAGTHEAIVDWDIDSDTITYSDRITAIVGLDPKDLDRSASWIALI 459

Query: 195 EPDQSLHDNYMHHYHE--TGERRIIGIGREVSGLKKSGTIFPLYLSISEVQLTDRKVY-- 250
            PD     +Y+        GE         ++G   +   + L    + ++  D ++Y  
Sbjct: 460 HPDH--RKDYLTRMDALLRGESSFFSCDFRLAGRAGAEERW-LRHRATALRRPDGQIYRL 516

Query: 251 TGFIHDITQQKLSEERLRRYAAELERSNRELQDFAYVSSHDLQEPLRKIQAFGDRLKTKE 310
           +G + DIT  +  E+RLR      E +NR   +F    SH+L+ PL  I  F + L ++ 
Sbjct: 517 SGAVGDITDSRRGEDRLREAKEAAEFANRAKSEFLTNMSHELRTPLNAIIGFSEVLHSEM 576

Query: 311 YEKL-SDQGKDYVDRMLNAASRMQNLINDLLDFSRVTSKSKAFVQVSLD--SVLTDVLSD 367
           +  L + Q  DY   + ++   + ++IND+LD SR+ +         LD   ++  V   
Sbjct: 577 FGPLGATQYLDYAASIRDSGRHLLDVINDILDVSRIEAGRATLFPEPLDFAEIVASVHRL 636

Query: 368 LEITIEKTGAQIQ---RAPLPHIEADPTQLRQLFQNLVSNAIKFRKENEQPQINIFAREL 424
           +    E  G +++      LP +  +  +L+Q+  NL+ NAIKF       +I + AR  
Sbjct: 637 VNQRAEAAGVRLKITLDPALPPLLGEARRLKQVLINLLGNAIKFTPAG--GEIALSARGD 694

Query: 425 QGKARMTSTPGDEMVEIHVQDNGIGFDEKYLDRIFNIFQRLEGQ---KYEGSGIGLAICR 481
           + K +M          I V D+GIG   + +      F++++GQ   +YEG+G+GL + +
Sbjct: 695 EDKGQMV---------IEVSDSGIGMAPEDIPLALEPFRQIDGQLARRYEGTGLGLPLSK 745

Query: 482 KIAVRHGGDITAHSQAGIGTTFIVTL 507
                HGG +   S  G GT   V L
Sbjct: 746 AFVELHGGTLRVDSTPGAGTRITVRL 771



 Score =  134 bits (338), Expect = 9e-36
 Identities = 63/165 (38%), Positives = 107/165 (64%), Gaps = 4/165 (2%)

Query: 124 GIVHDISDLKKTEEALRESESKINSIIQTAVDGIITIDRRGVMEMVNPAAARLFEYEEHE 183
           G++ DI++ +K  E +R+ E +++ I++T VDGI+ ID  G++E  NPAA RLF Y   E
Sbjct: 261 GLLTDITETRKASEQVRQREQRLDGIMKTVVDGIVVIDENGIIESFNPAAERLFGYRAEE 320

Query: 184 LIGRKINMLMPEPDQSLHDNYMHHYHETGERRIIGIGREVSGLKKSGTIFPLYLSISEVQ 243
           ++G  IN L+P  +   HD  +  Y +TG+  IIG GRE   L++ G++ P+ L+ISE++
Sbjct: 321 VVGASINRLIPGGESGRHDRSLRRYLQTGQAGIIGRGREELALRRDGSLLPVELAISELR 380

Query: 244 LTDRKVYTGFIHDITQQKLSEERLR----RYAAELERSNRELQDF 284
           L DR+++TG + DI+ +K ++ +LR    RYA  +  ++  + D+
Sbjct: 381 LDDRRIFTGLVRDISARKEADRQLRENEERYALAIAGTHEAIVDW 425