Pairwise Alignments

Query, 445 a.a., RagB/SusD family nutrient uptake outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 642 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 45.4 bits (106), Expect = 5e-09
 Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 2/81 (2%)

Query: 340 TAPVPIIRNEELILIYAEANIQTGDLEEAARALDIIRTRHGLEPYA-GPVTEEALIDELL 398
           +AP  + R  EL L  AE +   G+ +EA  AL+ +R R G+       +T    I + +
Sbjct: 497 SAPTILFRLAELYLNVAECHAALGNTQEAIDALNPVRERAGIPKLTLADITNNMTIKDWV 556

Query: 399 YQRRY-SLFFEGHRWIDVRRY 418
           +  R+  L+ EGHR+ DVRR+
Sbjct: 557 HNERFVELWNEGHRFFDVRRW 577



 Score = 25.0 bits (53), Expect = 0.007
 Identities = 9/35 (25%), Positives = 19/35 (54%)

Query: 11 TLAMLVLCLALPACEIDDIPDPNNTTIEDIRENTT 45
          ++A+++  L L +C+  D+  P    I+D   + T
Sbjct: 11 SIAVIITALGLTSCDYLDVVPPEQPNIDDAMSSPT 45