Pairwise Alignments

Query, 445 a.a., RagB/SusD family nutrient uptake outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 648 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 48.5 bits (114), Expect = 6e-10
 Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 11/90 (12%)

Query: 340 TAPVPIIRNEELILIYAEANIQTG-DLEEAARALDIIRTRHGLE-------PYAGP---V 388
           T P P+IR  +L L+YAEA  + G D       +D++R R GL+        Y G     
Sbjct: 497 TYPFPVIRMADLYLMYAEALNEKGEDYATVLPWIDMVRERSGLQGVKESWDQYVGNSKYA 556

Query: 389 TEEALIDELLYQRRYSLFFEGHRWIDVRRY 418
           T+  L   ++ +RR  L FEGH + DVRR+
Sbjct: 557 TQTGLRQIIMQERRIELAFEGHYFWDVRRW 586