Pairwise Alignments

Query, 445 a.a., RagB/SusD family nutrient uptake outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 442 a.a., hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 55.5 bits (132), Expect = 3e-12
 Identities = 57/202 (28%), Positives = 79/202 (39%), Gaps = 30/202 (14%)

Query: 235 ALAARVSVYRGNWEEALTNLEASFFDLNGDFDTGVYYVFGTGAGDQLNP--LFYPQN-AA 291
           A+ +RV +Y GNW+EA              +D     +      + LN      P N  +
Sbjct: 217 AMESRVRLYMGNWKEA--------------YDAAERILVQKSTLEDLNDPEAKLPNNYTS 262

Query: 292 GEVRVAHPTFITDATPGDDRLSKVSER------ARAATQRGLSGDYDVFVYKNNTAPVPI 345
            E+  A+  F  D T     +    E+       R      LSGD  +            
Sbjct: 263 AEMITAYEFFNDDVTSASILIPAFMEKYDANKDLRRNKYYSLSGDKYISKKSGKAEHNCT 322

Query: 346 IRNEELILIYAEANIQTGDLEEA-ARALDIIRTRHGLEPYA------GPVTEEALIDELL 398
            R  E+ L  AEA  Q   L EA  R L ++  R+  E YA        + +  LI E+L
Sbjct: 323 FRTGEIYLNAAEAAAQMNKLPEARTRLLQLMEKRYTPEGYAEKKKAVDAMNQADLIKEIL 382

Query: 399 YQRRYSLFFEGHRWIDVRRYDR 420
            +R   L FEGHRW D+RR  R
Sbjct: 383 EERALELAFEGHRWFDLRRTTR 404