Pairwise Alignments
Query, 1740 a.a., PAS domain S-box protein from Pontibacter actiniarum KMM 6156, DSM 19842
Subject, 1560 a.a., Multi-sensor Hybrid Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H
Score = 275 bits (702), Expect = 4e-77
Identities = 197/646 (30%), Positives = 315/646 (48%), Gaps = 44/646 (6%)
Query: 993 NRHYELTSFNRNFAQAFESRNSRQLEQFTPINDDSMVHESSYAFWEDKYKQAFAGQPQHF 1052
+R+ + S N NF + L I + + H+ + FW D + AG
Sbjct: 636 DRNGNIISINDNFCKLMGYTKDELLGLDHRIMNSGL-HDKT--FWADVWATISAGGSWRG 692
Query: 1053 EIQLKYPES---WREVYLNPIYLEDGSFEEVSGIALDITDKKKSQLALAENEEKFRRIFE 1109
E+ K + W + L P + EDGS + + +DITD+KK++ + R +
Sbjct: 693 EVCNKAKDGALYWLDSVLTPFFGEDGSIDRYVALRIDITDRKKAEAERNRSNTLLRSVLA 752
Query: 1110 SFQDVYYRSSLEDGTLELISPSITQLLGYEEHEVLGQST-LLFYTNPEDQTRIRQL---- 1164
S ++ ++ DG + + + +LLGY E++G+ T L + + R R L
Sbjct: 753 SAREFSIIATDPDGVITIFNSGAEKLLGYSAEEMVGKQTPALIHLADQVAERGRSLSDEF 812
Query: 1165 --------VAAEHTVRD-IEVE---MVCKDGTPKTIVLDAKLVYNEHGVPVAMEGVARDV 1212
V + RD +E + V KDG ++L + + G GVA+DV
Sbjct: 813 GVPIEGFRVFVHRSERDGVEAQEWTYVRKDGGHLEVLLVVTAIREDDGRIAGYLGVAQDV 872
Query: 1213 SELKRTQIALLTAKEEAENLLKVKTQFLANMSHELRTPMNGIIGMIDLLSQINTDPEQSE 1272
S K + AL+ AK+ AE VK QFLANMSHE+RTPMN I+GM+ L+ + P Q++
Sbjct: 873 SRRKEFERALVLAKQAAEEASVVKGQFLANMSHEIRTPMNAILGMLTLVQRTALTPHQAD 932
Query: 1273 YIDTLRKSSDALLAILNDILDLSKIQAGKLVLHESGVDLHETLDKIHSLFVNRAQQKDLT 1332
Y+ ++ +LL +LNDILD SKI+AGKL L L L + + K +
Sbjct: 933 YVCKAHSAAGSLLGLLNDILDFSKIEAGKLHLEPHPFRLETVLRDLAVVLSGSYGDKGVE 992
Query: 1333 FTYAIDPNVPRHVVTDETRLLQVLSNLTSNAIKFTNAGEVSIHVGAEQLDRKHFRLHVRV 1392
+ I P++P + D+ RL QVL NL NA+KFT+ G+V + VG + + + V
Sbjct: 993 VLFDIAPHLPDSFIGDDLRLRQVLLNLAGNALKFTDQGQVIVSVGVLAREDDRLTMRMAV 1052
Query: 1393 KDSGIGISPEGQELLFNDFTQLDNSSTKTFGGTGLGLAISRQLTHLLGGDIGVESIPGDG 1452
D+GIGI+ + +F F Q + S+T+ FGG+GLGL I+R L +GG + VES PG G
Sbjct: 1053 SDTGIGIAADQLASIFGAFEQAETSTTRRFGGSGLGLTITRHLVERMGGVLRVESQPGRG 1112
Query: 1453 SVFWFNIKVRLASTLEVEQQQLRQQQQLQEVESLTYTPYVLLVDDNQINQKVAQKQLERL 1512
S FWF+I TL V + + + + VL+V+DN + + + ++ L
Sbjct: 1113 SRFWFDI------TLPVSGEGSESAESGRPLR-------VLVVEDNPVAGGILAQTVQGL 1159
Query: 1513 GCITEIASNGYEAIER-----ATTKKYNIIFMDIQMPEMDGVTATKHIKEQLGSACP-PI 1566
G ++ E R A + Y+ + +D +MPE+DG+T + ++E + CP I
Sbjct: 1160 GYDCDLVQESAETKARIVAADAAGRPYDAVLLDWRMPEVDGLTTARILREMGVTLCPQSI 1219
Query: 1567 VAMTAY--SMKDDAAKFMGQGMDDYVSKPVKSSDLHAMISKWENTT 1610
+ +TAY + A + D ++KPV L + + + T
Sbjct: 1220 IMVTAYGRDVLSLAEQTGDAPFDAVLTKPVTPGQLRDALLRRDRAT 1265
Score = 90.5 bits (223), Expect = 1e-21
Identities = 66/231 (28%), Positives = 111/231 (48%), Gaps = 14/231 (6%)
Query: 1492 VLLVDDNQINQKVAQKQLERLGCITEIASNGYEAIERATTKK--YNIIFMDIQMPEMDGV 1549
+L+V+DN IN++VA + L G ++A G + + Y+ + MDIQMP++DG
Sbjct: 1287 LLVVEDNAINRQVAAELLAGAGAEIDLAEGGERGVMMVLRGEIAYDAVLMDIQMPDIDGF 1346
Query: 1550 TATKHIKEQLGSACPPIVAMTAYSMKDDAAKFMGQGMDDYVSKPVKSSDLHAMISKWENT 1609
AT+ I+ PIVAMTA + + D + GM ++V KP+ D+ A I +
Sbjct: 1347 EATRRIRADARFKALPIVAMTANASRADREACLAAGMTEHVGKPI---DITATIDVLVSL 1403
Query: 1610 TWHAAPETEEEAPDTETG----EPIIDLAVVEQL----KQIGGE-DFTKQLYTEFEEEAA 1660
E E AP + G E D ++E L +++GG+ D ++L F E
Sbjct: 1404 MTEGMTEGEPIAPPSPMGGTGREVPSDEPLLEDLDSIAERLGGQVDLLRRLLPTFAERTG 1463
Query: 1661 ELIAEAKKELSVQHYKGILSTLHQLKGTGFTLGINPLAELAKQLEHDIKNE 1711
EL+ E + + + + H +KG+ ++G LA A E ++ +
Sbjct: 1464 ELLDEIEDLIGRGDWSALSMAFHTIKGSAASMGAVALASHAALWEERLRED 1514
Score = 40.0 bits (92), Expect = 2e-06
Identities = 41/182 (22%), Positives = 83/182 (45%), Gaps = 6/182 (3%)
Query: 1081 SGIALDITDKKKSQLALAENEEKFRRIFESFQDVYYRSSLEDGTLELISPSITQLLGYEE 1140
+G A I + + +A+ + + I E+ D +L DGT+ + + L GY+
Sbjct: 326 AGFAAVIGLNQARRREIAQAQARLSTIVENSGDAIIGEAL-DGTIVGWNRAAEALFGYKA 384
Query: 1141 HEVLGQST--LLFYTN--PEDQTRIRQLVAAEHTVRDIEVEMVCKDGTPKTIVLDAKLVY 1196
EV+G++ LL + E+Q+ + ++ E V + + + DG + + A V+
Sbjct: 385 PEVIGKALAPLLIPADRMAENQSIVLSALSGE-AVMAFDTQRIHADGHLFDVSMTACPVH 443
Query: 1197 NEHGVPVAMEGVARDVSELKRTQIALLTAKEEAENLLKVKTQFLANMSHELRTPMNGIIG 1256
+ G V + + RD+ + K + +LL + E + +T L L+T ++ +
Sbjct: 444 DRLGHVVGVANLIRDIRKRKAAEQSLLEFNAQLEKQVASRTAELEKARRALQTVLDSVPS 503
Query: 1257 MI 1258
MI
Sbjct: 504 MI 505
Score = 38.1 bits (87), Expect = 9e-06
Identities = 45/169 (26%), Positives = 72/169 (42%), Gaps = 23/169 (13%)
Query: 440 KDGIVVECNDKAIEFFRCTREDLIGKSPKDYSPEFQPDGQNSVEKTERLMRDLLTT---G 496
++G ++ ND + T+++L+G + NS + D+ T G
Sbjct: 637 RNGNIISINDNFCKLMGYTKDELLGLDHRI---------MNSGLHDKTFWADVWATISAG 687
Query: 497 RSVTFEWKNRRKDGTLFDTEITVNRLI-LDG--EYYVQAFKRDITQRKLAQQARRREE-V 552
S E N+ KDG L+ + + DG + YV A + DIT RK A+ R R +
Sbjct: 688 GSWRGEVCNKAKDGALYWLDSVLTPFFGEDGSIDRYV-ALRIDITDRKKAEAERNRSNTL 746
Query: 553 LRESMDQFRNFLDKVNLIYYSLDKKGNIAFANNYFMKYVEYTEEEMIGQ 601
LR + R F + D G I N+ K + Y+ EEM+G+
Sbjct: 747 LRSVLASAREFS------IIATDPDGVITIFNSGAEKLLGYSAEEMVGK 789
Score = 36.6 bits (83), Expect = 2e-05
Identities = 43/218 (19%), Positives = 92/218 (42%), Gaps = 12/218 (5%)
Query: 523 ILDGEYY-VQAFKRDITQRKLAQQARRREEVLRESMDQFRNFLDKVNLIYYSLDKKGNIA 581
++DGE A D+++ L + ++ + LRE+ R ++ L+ D+ GNI
Sbjct: 587 VVDGEVLGFYALVHDVSE--LVEGRQKLDAALRENEALLRTIDEQ--LLCSITDRNGNII 642
Query: 582 FANNYFMKYVEYTEEEMIGQNFYELLVPKHDRAQRLQDFHKAMETKHLSSYYERDVVTKS 641
N+ F K + YT++E++G + + HD+ + T + +V K+
Sbjct: 643 SINDNFCKLMGYTKDELLGLDHRIMNSGLHDKT----FWADVWATISAGGSWRGEVCNKA 698
Query: 642 --GQLKTIRWNCMFEYNQEGEVTGLTSVGKDMTDKRIAMEALKDNKIRLQDLFDNAHDL- 698
G L + + ++G + ++ D+TD++ A + L+ + +A +
Sbjct: 699 KDGALYWLDSVLTPFFGEDGSIDRYVALRIDITDRKKAEAERNRSNTLLRSVLASAREFS 758
Query: 699 IQNISVDNKFIFVNKAWKDRLGYTDQDIESLTLNDIVH 736
I D N + LGY+ +++ ++H
Sbjct: 759 IIATDPDGVITIFNSGAEKLLGYSAEEMVGKQTPALIH 796