Pairwise Alignments
Query, 441 a.a., membrane-binding protein from Pontibacter actiniarum KMM 6156, DSM 19842
Subject, 580 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1
Score = 107 bits (266), Expect = 1e-27
Identities = 84/339 (24%), Positives = 153/339 (45%), Gaps = 29/339 (8%)
Query: 99 GPFKAFRPDGKLLQEGYYE-NDQQSKLFKTFFDDGTLKKETAFVDGFPEGLVREYYPSGK 157
G F+ F PDG+L ++G + N +++DGTL E +++G G + YY +G+
Sbjct: 81 GDFEFFYPDGQLSRKGQSDANGSYQGTHLHYWEDGTLSGEYHYLNGQLHGEQKSYYTNGQ 140
Query: 158 LKSEITYKRSKQNGPAKTFYANGSLETEASYNNGMLEGSYKTYFDNGQVQTEVQNVAGEK 217
L+ + ++G A++++ NG L+T +Y +EG Y+++ +NGQ + V VAG++
Sbjct: 141 LRDHQHHVNGTESGLAQSYFDNGQLQTRVTYGANGMEGLYESFHNNGQPEQTVNMVAGKR 200
Query: 218 HGSYKSYYRSGKLSTEGSFLAGKMHGPAKSYYESGKTRSVINYKNGEVNGTAQVFYEDGT 277
G + + G L T+ ++ GK+HG Y + R + +Y++ + G Q F + G
Sbjct: 201 EGERLYWTKEGWLFTKEFYIKGKLHGEVLVYQAADVLREIKHYQHDKQVGNQQRFDKQGL 260
Query: 278 LKEEVSASNNGADSKTARYYPSGNLEAEEQLKD----------------KKKHGTWKVYY 321
L E+ +G + + Y + N+ + + K T + +
Sbjct: 261 LAEQQQYDKDGREIQHFTYDNASNVATQTDTQYLAQSRIVVTQTDTQYLAKGRITNEQRF 320
Query: 322 DAPGKKLKHSENYAADKLTGEHL--SYYDNGQVEERETYEKGKVVGTAYTYYPSGKLKSE 379
D G + Y D + L + +G++ RE KG+ G +G ++
Sbjct: 321 DTSGNLI---YQYQRDTVKDWSLLQRFTASGELIGREEQLKGQYQGLYIGDGWNGYIR-R 376
Query: 380 TNHKDGLRFGPYKAYFEDGKVE---VLGQFRNNRETGTW 415
N+ G G AY ED V+ V GQ+ + G W
Sbjct: 377 INYSKGKMHG---AYREDNAVDGGFVTGQYHFGAKVGKW 412
Score = 87.8 bits (216), Expect = 8e-22
Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 12/229 (5%)
Query: 167 SKQNG--PAKTFYANGSLETEASYNNG------MLEGSYKTYFDNGQVQTEVQNVA-GEK 217
++QNG P + FY NG + G ++ ++ +GQ+ + Q+ A G
Sbjct: 45 TEQNGVWPVQLFYVETDKPVFKGSVNGPNLAESYIVGDFEFFYPDGQLSRKGQSDANGSY 104
Query: 218 HGSYKSYYRSGKLSTEGSFLAGKMHGPAKSYYESGKTRSVINYKNGEVNGTAQVFYEDGT 277
G++ Y+ G LS E +L G++HG KSYY +G+ R ++ NG +G AQ ++++G
Sbjct: 105 QGTHLHYWEDGTLSGEYHYLNGQLHGEQKSYYTNGQLRDHQHHVNGTESGLAQSYFDNGQ 164
Query: 278 LKEEVSASNNGADSKTARYYPSGNLEAEEQLKDKKKHGTWKVYYDAPGKKLKHSENYAAD 337
L+ V+ NG + ++ +G E + K+ G ++Y+ G L E Y
Sbjct: 165 LQTRVTYGANGMEGLYESFHNNGQPEQTVNMVAGKREGE-RLYWTKEG-WLFTKEFYIKG 222
Query: 338 KLTGEHLSYYDNGQVEERETYEKGKVVGTAYTYYPSGKLKSETNH-KDG 385
KL GE L Y + E + Y+ K VG + G L + + KDG
Sbjct: 223 KLHGEVLVYQAADVLREIKHYQHDKQVGNQQRFDKQGLLAEQQQYDKDG 271
Score = 60.5 bits (145), Expect = 1e-13
Identities = 86/415 (20%), Positives = 159/415 (38%), Gaps = 57/415 (13%)
Query: 28 TYHDDTFTQVKEKYFITSDSAIVGYYHRYYPTGEPEALVKFVEGKKDS----------VY 77
+Y D+ Q + Y + + G Y ++ G+PE V V GK++ ++
Sbjct: 158 SYFDNGQLQTRVTY---GANGMEGLYESFHNNGQPEQTVNMVAGKREGERLYWTKEGWLF 214
Query: 78 T-EFYPSGQPKLQLT-------------YNQGVKQGPFKAFRPDGKLLQEGYYENDQQSK 123
T EFY G+ ++ Y + G + F G L ++ Y+ D +
Sbjct: 215 TKEFYIKGKLHGEVLVYQAADVLREIKHYQHDKQVGNQQRFDKQGLLAEQQQYDKDGREI 274
Query: 124 LFKTFFDDGTLKKETAFVDGFPEGLV-----REYYPSGKLKSEITYKRS----------- 167
T+ + + +T +V +Y G++ +E + S
Sbjct: 275 QHFTYDNASNVATQTDTQYLAQSRIVVTQTDTQYLAKGRITNEQRFDTSGNLIYQYQRDT 334
Query: 168 -KQNGPAKTFYANGSLETEASYNNGMLEGSYKTYFDNGQVQTEVQNVAGEKHGSYKSYYR 226
K + F A+G L G +G Y NG ++ + G+ HG+Y+
Sbjct: 335 VKDWSLLQRFTASGELIGREEQLKGQYQGLYIGDGWNGYIR-RINYSKGKMHGAYRE--- 390
Query: 227 SGKLSTEGSFLAGKMHGPAKS----YYESGKTRSVINYKNGEVNGTAQVFYEDGTLKEEV 282
+ +G F+ G+ H AK + TR+ + G++NG DGT+ +
Sbjct: 391 --DNAVDGGFVTGQYHFGAKVGKWVTKNADMTRNEQFNQQGQLNGEQIEIAADGTVMLQA 448
Query: 283 SASNNGADSKTARYYPSGNLEAEEQLKDKKKHGTWKVYYDAPGK-KLKHSENYAADKLTG 341
N+ + L+A+ Q + ++ G W V + + KL H + Y A G
Sbjct: 449 FYKNDKLHGAYLQRDFDKQLQAQGQYINGQREGKWLVDESSYNQVKLWHGQ-YRAGHEVG 507
Query: 342 EHLSYYDNGQVEERETYE-KGKVVGTAYTYYPSGKLKSETNHKDGLRFGPYKAYF 395
+ ++ NG + + Y+ KG++ G +Y++ G L + D G YF
Sbjct: 508 QWQAFSANGHLLGQMQYDNKGQLQGKSYSFNEDGSLLRSEEYVDNQLHGKLIYYF 562
Score = 56.6 bits (135), Expect = 2e-12
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 14/220 (6%)
Query: 230 LSTEGSFLAGKMHGP--AKSY--------YESGK-TRSVINYKNGEVNGTAQVFYEDGTL 278
+ T+ G ++GP A+SY Y G+ +R + NG GT ++EDGTL
Sbjct: 58 VETDKPVFKGSVNGPNLAESYIVGDFEFFYPDGQLSRKGQSDANGSYQGTHLHYWEDGTL 117
Query: 279 KEEVSASNNGADSKTARYYPSGNLEAEEQLKDKKKHGTWKVYYDAPGKKLKHSENYAADK 338
E N + YY +G L + + + G + Y+D +L+ Y A+
Sbjct: 118 SGEYHYLNGQLHGEQKSYYTNGQLRDHQHHVNGTESGLAQSYFD--NGQLQTRVTYGANG 175
Query: 339 LTGEHLSYYDNGQVEERETYEKGKVVGTAYTYYPSGKLKSETNHKDGLRFGPYKAYFEDG 398
+ G + S+++NGQ E+ GK G + G L ++ + G G Y
Sbjct: 176 MEGLYESFHNNGQPEQTVNMVAGKREGERLYWTKEGWLFTKEFYIKGKLHGEVLVYQAAD 235
Query: 399 KVEVLGQFRNNRETGTWKYHSPAGKVMKTRLY-RNGQVIE 437
+ + ++++++ G + G + + + Y ++G+ I+
Sbjct: 236 VLREIKHYQHDKQVGNQQRFDKQGLLAEQQQYDKDGREIQ 275
Score = 56.6 bits (135), Expect = 2e-12
Identities = 88/462 (19%), Positives = 165/462 (35%), Gaps = 84/462 (18%)
Query: 45 SDSAIVGYYHRYYPTGEPEALVKF-VEGKKDSVYTEFYPSGQPKLQLTYNQGVKQGPFKA 103
++S IVG + +YP G+ + G + ++ G + Y G G K+
Sbjct: 75 AESYIVGDFEFFYPDGQLSRKGQSDANGSYQGTHLHYWEDGTLSGEYHYLNGQLHGEQKS 134
Query: 104 FRPDGKLLQEGYYENDQQSKLFKTFFDDGTLKKETAFVDGFPEGLVREYYPSGKLKSEIT 163
+ +G+L ++ N +S L +++FD+G L+ + EGL ++ +G+ + +
Sbjct: 135 YYTNGQLRDHQHHVNGTESGLAQSYFDNGQLQTRVTYGANGMEGLYESFHNNGQPEQTVN 194
Query: 164 YKRSKQNGPAKTFYANGSLETEASYNNGMLEGSYKTYFDNGQVQTEVQNVAGEKH-GSYK 222
K+ G + G L T+ Y G L G Y V E+++ +K G+ +
Sbjct: 195 MVAGKREGERLYWTKEGWLFTKEFYIKGKLHGEVLVY-QAADVLREIKHYQHDKQVGNQQ 253
Query: 223 SYYRSGKLS--------------------------TEGSFLAGKMHGPAKSYYESGKTRS 256
+ + G L+ T+ +LA ++ +
Sbjct: 254 RFDKQGLLAEQQQYDKDGREIQHFTYDNASNVATQTDTQYLAQSRIVVTQTDTQYLAKGR 313
Query: 257 VINYKNGEVNGTAQVFYEDGTLKEEVSASNNGADSKTARYYPSGNLEA-EEQLKDK---- 311
+ N + + +G Y+ T+K+ S R+ SG L EEQLK +
Sbjct: 314 ITNEQRFDTSGNLIYQYQRDTVKDW---------SLLQRFTASGELIGREEQLKGQYQGL 364
Query: 312 ------------------KKHGTWKVYYDAPGKKLKHSENYAAD---------------- 337
K HG ++ G + ++ A
Sbjct: 365 YIGDGWNGYIRRINYSKGKMHGAYREDNAVDGGFVTGQYHFGAKVGKWVTKNADMTRNEQ 424
Query: 338 -----KLTGEHLSYYDNGQVEERETYEKGKVVGTAYTYYPSGKLKSETNHKDGLRFGPYK 392
+L GE + +G V + Y+ K+ G +L+++ + +G R G +
Sbjct: 425 FNQQGQLNGEQIEIAADGTVMLQAFYKNDKLHGAYLQRDFDKQLQAQGQYINGQREGKWL 484
Query: 393 AYFEDGKVEVL--GQFRNNRETGTWKYHSPAGKVMKTRLYRN 432
L GQ+R E G W+ S G ++ Y N
Sbjct: 485 VDESSYNQVKLWHGQYRAGHEVGQWQAFSANGHLLGQMQYDN 526
Score = 52.8 bits (125), Expect = 3e-11
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 11/181 (6%)
Query: 264 EVNGT--AQVFYEDGTLKEEVSASNNGADSKTAR-------YYPSGNLEAEEQLKDKKKH 314
E NG Q+FY + T K S NG + + +YP G L + Q +
Sbjct: 46 EQNGVWPVQLFYVE-TDKPVFKGSVNGPNLAESYIVGDFEFFYPDGQLSRKGQSDANGSY 104
Query: 315 GTWKVYYDAPGKKLKHSENYAADKLTGEHLSYYDNGQVEERETYEKGKVVGTAYTYYPSG 374
++Y G L +Y +L GE SYY NGQ+ + + + G G A +Y+ +G
Sbjct: 105 QGTHLHYWEDGT-LSGEYHYLNGQLHGEQKSYYTNGQLRDHQHHVNGTESGLAQSYFDNG 163
Query: 375 KLKSETNHKDGLRFGPYKAYFEDGKVEVLGQFRNNRETGTWKYHSPAGKVMKTRLYRNGQ 434
+L++ + G Y+++ +G+ E + G Y + G + Y G+
Sbjct: 164 QLQTRVTYGANGMEGLYESFHNNGQPEQTVNMVAGKREGERLYWTKEGWLFTKEFYIKGK 223
Query: 435 V 435
+
Sbjct: 224 L 224
Score = 51.2 bits (121), Expect = 8e-11
Identities = 84/428 (19%), Positives = 156/428 (36%), Gaps = 83/428 (19%)
Query: 36 QVKEKYFITSDSAIVGYYHRYYPTGEPEALVKFVEGKKDSVYTEFYPSGQPKLQLTYNQG 95
Q+ K ++ + G + Y+ G ++ G+ +Y +GQ + + G
Sbjct: 91 QLSRKGQSDANGSYQGTHLHYWEDGTLSGEYHYLNGQLHGEQKSYYTNGQLRDHQHHVNG 150
Query: 96 VKQGPFKAFRPDGKLLQEGYYENDQQSKLFKTFFDDGTLKKETAFVDGFPEG-------- 147
+ G +++ +G+L Y + L+++F ++G ++ V G EG
Sbjct: 151 TESGLAQSYFDNGQLQTRVTYGANGMEGLYESFHNNGQPEQTVNMVAGKREGERLYWTKE 210
Query: 148 ---LVREYYPSGKLKSEIT-------------YKRSKQNGPAKTFYANGSLETEASYNNG 191
+E+Y GKL E+ Y+ KQ G + F G L + Y+
Sbjct: 211 GWLFTKEFYIKGKLHGEVLVYQAADVLREIKHYQHDKQVGNQQRFDKQGLLAEQQQYDKD 270
Query: 192 MLEGSYKTYFDNGQVQTEVQNVAGEKHGSYKSYYRSGKLSTEGSFLAGKMHGPAKSYYES 251
E + TY DN NVA + Y + R T+ +LA
Sbjct: 271 GREIQHFTY-DN------ASNVATQTDTQYLAQSRIVVTQTDTQYLA------------K 311
Query: 252 GKTRSVINYKNGEVNGTAQVFYEDGTLKEEVSASNNGADSKTARYYPSGNL-EAEEQLKD 310
G+ + N + + +G Y+ T+K+ S R+ SG L EEQLK
Sbjct: 312 GR---ITNEQRFDTSGNLIYQYQRDTVKDW---------SLLQRFTASGELIGREEQLKG 359
Query: 311 K----------------------KKHGTWKVYYDAPGKKLKHSENYAADKLTGEHLSYYD 348
+ K HG ++ G + ++ A G+ ++
Sbjct: 360 QYQGLYIGDGWNGYIRRINYSKGKMHGAYREDNAVDGGFVTGQYHFGAK--VGKWVT--K 415
Query: 349 NGQVEERETY-EKGKVVGTAYTYYPSGKLKSETNHKDGLRFGPYKAYFEDGKVEVLGQFR 407
N + E + ++G++ G G + + +K+ G Y D +++ GQ+
Sbjct: 416 NADMTRNEQFNQQGQLNGEQIEIAADGTVMLQAFYKNDKLHGAYLQRDFDKQLQAQGQYI 475
Query: 408 NNRETGTW 415
N + G W
Sbjct: 476 NGQREGKW 483
Score = 45.8 bits (107), Expect = 4e-09
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 4/149 (2%)
Query: 94 QGVKQGPFKAFRPDGKLLQEGYYENDQQSKLFKTFFDDGTLKKETAFVDGFPEG--LVRE 151
QG G DG ++ + +Y+ND+ + D L+ + +++G EG LV E
Sbjct: 428 QGQLNGEQIEIAADGTVMLQAFYKNDKLHGAYLQRDFDKQLQAQGQYINGQREGKWLVDE 487
Query: 152 YYPSGKLKSEITYKRSKQNGPAKTFYANGSLETEASYNN-GMLEGSYKTYFDNGQVQTEV 210
+ Y+ + G + F ANG L + Y+N G L+G ++ ++G +
Sbjct: 488 SSYNQVKLWHGQYRAGHEVGQWQAFSANGHLLGQMQYDNKGQLQGKSYSFNEDGSLLRSE 547
Query: 211 QNVAGEKHGSYKSYYRSGKLSTEGSFLAG 239
+ V + HG YY +G+ S+E + G
Sbjct: 548 EYVDNQLHGKL-IYYFNGEASSEYRYQHG 575
Score = 45.4 bits (106), Expect = 5e-09
Identities = 55/246 (22%), Positives = 91/246 (36%), Gaps = 64/246 (26%)
Query: 132 GTLKKETAFVDGFPEGLVREYYPSGK--------LKSEITYKRSKQNGPAKTFYANGSLE 183
G +++ A GF G GK ++E ++ + NG A+G++
Sbjct: 386 GAYREDNAVDGGFVTGQYHFGAKVGKWVTKNADMTRNEQFNQQGQLNGEQIEIAADGTVM 445
Query: 184 TEASYNNGMLEGSYKTYFDNGQVQTEVQNVAGEKHGSY---KSYYRSGKLSTEGSFLAGK 240
+A Y N L G+Y + Q+Q + Q + G++ G + +S Y KL G + AG
Sbjct: 446 LQAFYKNDKLHGAYLQRDFDKQLQAQGQYINGQREGKWLVDESSYNQVKL-WHGQYRAGH 504
Query: 241 MHGPAKSYYESGKTRSVINYKN-GEVNGTAQVFYEDGTLKEEVSASNNGADSKTARYYPS 299
G +++ +G + Y N G++ G + F EDG+
Sbjct: 505 EVGQWQAFSANGHLLGQMQYDNKGQLQGKSYSFNEDGS---------------------- 542
Query: 300 GNLEAEEQLKDKKKHGTWKVYYDAPGKKLKHSENYAADKLTGEHLSYYDNGQVEERETYE 359
L SE Y ++L G+ L YY NG+ Y+
Sbjct: 543 ----------------------------LLRSEEYVDNQLHGK-LIYYFNGEASSEYRYQ 573
Query: 360 KGKVVG 365
G VG
Sbjct: 574 HGVDVG 579
Score = 36.6 bits (83), Expect = 2e-06
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 92 YNQGVKQGPFKAFRPDGKLLQEGYYEN--DQQSKLFKTFFDDGTLKKETAFVDGFPEGLV 149
Y G + G ++AF +G LL + Y+N Q K + +F +DG+L + +VD G +
Sbjct: 500 YRAGHEVGQWQAFSANGHLLGQMQYDNKGQLQGKSY-SFNEDGSLLRSEEYVDNQLHGKL 558
Query: 150 REYYPSGKLKSEITYKRSKQNG 171
YY +G+ SE Y+ G
Sbjct: 559 -IYYFNGEASSEYRYQHGVDVG 579