Pairwise Alignments

Query, 441 a.a., membrane-binding protein from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 577 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 96.3 bits (238), Expect = 2e-24
 Identities = 103/393 (26%), Positives = 168/393 (42%), Gaps = 42/393 (10%)

Query: 77  YTEFYPSGQPKLQLTYN-QGVKQGPFKAFRPDGKLLQEGYYENDQQSKLFKTFFDDGTLK 135
           Y  ++  G+P  Q   N QG   G  K +   G+L  E +YEN  +  L   +++ G ++
Sbjct: 91  YQCYFEDGKPYEQGFRNEQGQLHGLLKKYIATGQLYSESHYENGVKQGLETGYWNGGNIR 150

Query: 136 KETAFVDGFPEGLVREYYPSGKLKSEITYKRSKQNGPAKTFYANGSLETEASYNNGMLEG 195
            +T F DG   G+   + P G    EIT K          ++  G L  E    +G+L+G
Sbjct: 151 YKTTFKDGQEVGISEHFGPEG----EITAKICNDPTCVSQYFNLGKLNREEHRVDGLLQG 206

Query: 196 SYKTYFDNGQVQTEVQNVAGEKHGSYKSYYRSGKLSTEGSFLAGKMHGPAKSYYESG--K 253
           +  T+  NGQV +  + V  ++HG Y +Y+ +GK+     + A    G   +YYE+G  +
Sbjct: 207 TETTWGLNGQVISTQEYVKDKRHGDYFAYFDNGKVKHHFQYQADYKVGEQLTYYENGQIQ 266

Query: 254 TRSVINYKNGEVNGTAQVFYEDGTLKEEVSA---SNNGADSKTARYYPSGNLEAEEQLKD 310
            + V N K   +   A  + E G +K+   +    N     K  R+     +E+ E   D
Sbjct: 267 LKEVTNDKGDALQ--AIEYDEQGQIKKTTDSKYQGNRWVYRKQQRFSKGQLIESTE--ND 322

Query: 311 KKKHGTWKVYYDAPGKKLKHSENYAADKLTG---EHLSYYDNGQVEERETYEKGKVVGTA 367
             K+  W +  D    +L +       KLTG   E +       V  RE +  GK  G A
Sbjct: 323 LLKN--WSLSEDYEQGELVNRREELDKKLTGLYVESVKSRSGTDVITREHFNAGKREG-A 379

Query: 368 YTY----YPSGK--LKSETNHKDGLRFGPYKAYFEDGKV--------EVLGQFRNNRETG 413
           Y      + +GK  +  +  + +    G +K   ED  +        E+ G+FRN   +G
Sbjct: 380 YEMVKFDHETGKRWVAEQGQYTNDKPSGKWKKQQEDASLTFSYDDNGELHGEFRNQTSSG 439

Query: 414 ------TWKYHSPAGKVMKTRLYRNGQVIEENE 440
                  + + +P G V   R   NGQ+ E+ E
Sbjct: 440 QLLELINFNHGNPDGLVQ--RYANNGQLYEKGE 470



 Score = 44.7 bits (104), Expect = 8e-09
 Identities = 73/354 (20%), Positives = 140/354 (39%), Gaps = 62/354 (17%)

Query: 60  GEPEALVKFVEGKKDSVYTEFYPSGQPKLQLTYNQGVKQGPFKAFRPDGKLLQEGYYEND 119
           G+  +  ++V+ K+   Y  ++ +G+ K    Y    K G    +  +G++ Q     ND
Sbjct: 215 GQVISTQEYVKDKRHGDYFAYFDNGKVKHHFQYQADYKVGEQLTYYENGQI-QLKEVTND 273

Query: 120 QQSKLFKTFFDD-GTLKKETAFV-----------DGFPEGLVREYYPSGKLKS------- 160
           +   L    +D+ G +KK T                F +G + E   +  LK+       
Sbjct: 274 KGDALQAIEYDEQGQIKKTTDSKYQGNRWVYRKQQRFSKGQLIESTENDLLKNWSLSEDY 333

Query: 161 ---EITYKRSKQNGPAKTFYANG-------SLETEASYNNGMLEGSYKTY-FDNGQVQTE 209
              E+  +R + +      Y           + T   +N G  EG+Y+   FD+   +T 
Sbjct: 334 EQGELVNRREELDKKLTGLYVESVKSRSGTDVITREHFNAGKREGAYEMVKFDH---ETG 390

Query: 210 VQNVAGEKHGSYKSYYRSGKLSTEGSFLA--------GKMHGPAKSYYESGKTRSVINYK 261
            + VA  + G Y +   SGK   +    +        G++HG  ++   SG+   +IN+ 
Sbjct: 391 KRWVA--EQGQYTNDKPSGKWKKQQEDASLTFSYDDNGELHGEFRNQTSSGQLLELINFN 448

Query: 262 NGEVNGTAQVFYEDGTLKEEVSASNNGADSKTARYYPSGNLEAEEQLKDKKKHGTWKVYY 321
           +G  +G  Q +  +G L E+    N   D      +  G          ++++  W   +
Sbjct: 449 HGNPDGLVQRYANNGQLYEKGEYRNGQQDGDW--IFTDGEYGFRPIPNPERRY--WYGRF 504

Query: 322 DAPGKKLKH-----SENYAAD--------KLTGEHLSYYDNGQVEERETYEKGK 362
           D  GK++ H     SE+Y           +L G+   + ++G +E   +Y+ G+
Sbjct: 505 D-QGKQVGHWELRSSEDYVLQIANYDEQGRLHGKQYEFEEHGWIEVINSYDHGQ 557