Pairwise Alignments

Query, 306 a.a., mechanosensitive ion channel protein MscS from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 328 a.a., small-conductance mechanosensitive channel mcsS from Caulobacter crescentus NA1000

 Score = 40.8 bits (94), Expect = 4e-08
 Identities = 65/223 (29%), Positives = 89/223 (39%), Gaps = 35/223 (15%)

Query: 82  SIATFLGLLSAGLVLALREPVLNMAGWVFIIWKRPFRIGDRIQVGEHIGDVIDTRLFQFS 141
           SI   LG  S  + LAL+  + N+A  V I+  RP+++GD I+     G V    L  F+
Sbjct: 108 SIIAVLGAASLAIGLALQGALSNVAAGVMILLFRPYKVGDFIETATRQGTVKSLDLL-FT 166

Query: 142 LNEVQGWVKADQATGRVVNIPNLKVFTETQANYNYGFPFIWQEIPVRITFESNWQKAKTI 201
                  VK        V IPN KVF +   NY+       +   V + F+      KT 
Sbjct: 167 EIATPDNVK--------VMIPNSKVFGDVILNYS-----THRNRRVDVLFK---VPLKTD 210

Query: 202 LRDIMQRHAEQLTEAARQQIKRQSQRHLIFYEDLQP-------RLYTTVCDNGIELTMRY 254
           L  +++R  E+    AR    RQ    +I   DL         R++T   D G   T   
Sbjct: 211 LVAVLKRLRERAENDAR---IRQDPAPMIEVTDLSEAYAQAAIRVWTAAADFGPVKT--- 264

Query: 255 VCSLMRRRQSAHLVWEDVLTEFLSSPDIRFAYPTTRFYQGGGE 297
              LM    SAHL+ ED     L  P    A   +    G GE
Sbjct: 265 --DLM---LSAHLLSEDSARTDLPPPRPSKATDPSPAMPGEGE 302