Pairwise Alignments

Query, 1009 a.a., SusC/RagA family TonB-linked outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 1035 a.a., outer membrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  364 bits (935), Expect = e-104
 Identities = 287/993 (28%), Positives = 478/993 (48%), Gaps = 78/993 (7%)

Query: 14   LPGVSVTVKGKARGSVTDAVGHYTISNVEPSDVLVFSFIGMKPVERTVGNASTIDVALQT 73
            L G ++  KG A G+VTD  G++ +  V  S VL  SF+G +  E +V   S ++V L+ 
Sbjct: 56   LIGATIREKGGANGTVTDVEGNFFLF-VPDSAVLQISFVGYESQEVSVKGRSMLEVCLKE 114

Query: 74   DNETLDEVVVTALGIKQEKKALGYAVTEVKGATIAQTQRENFVNGLAGRVAGVDINTTSG 133
            +   LD V+VTALG+++++ +L YAV +V+G  + + +  N +  LAG+ AGV ++  S 
Sbjct: 115  NILLLDHVIVTALGLEKKESSLAYAVQKVRGEELNRVKEVNMITALAGKAAGVQVSKNSS 174

Query: 134  LPGASTSIMIRGVSSLSGSNQPLFVVDGLPISNSTFNTTAFASTASSATSLDNRATDFTN 193
              G S  + IRGV S++G NQPL+V+DG+P+ NST +  A+++   +A +  NR  D  +
Sbjct: 175  GMGGSAKVSIRGVRSVAGDNQPLYVIDGVPMLNST-SEQAYSAIGGTANA-GNR--DGGD 230

Query: 194  RAADINPEDIESITILKGPEASALYGIDAASGAVVITTKRGK-AGAPRIDYSNSFRVERI 252
              +++NPED+ESI+ILKG  A+ALYG  AA+G ++ITTK+G   G   I +S     E+ 
Sbjct: 231  GISNLNPEDVESISILKGAPAAALYGSQAANGVILITTKKGNTVGRRDIHFSTGLTFEKA 290

Query: 253  NKFPEIQKVYGLGNNGVDDNTGGVTSYFGGRYPEGTQFYDNVDNFFENGFTQKHNVSLSG 312
               PE+Q  YG+ +         VT  +G +  E    YDN+ +FF  G T   +VS++ 
Sbjct: 291  FSLPEMQNSYGVSD---------VTDSWGEK--ENLTVYDNLGDFFRTGLTSITSVSVNS 339

Query: 313  GSEKATYRISGGYTGQEGFVPGTDLTKFNLSSAVTAEM-NKYISADLTF-AYTYTDNSSA 370
            G++K     S   T   G +    L+K N++   TA + N  +  D        T  +  
Sbjct: 340  GNDKLQTYFSYANTTGRGILNENKLSKHNINLRETAVLFNSRLKLDGNVNVMKQTVKNKP 399

Query: 371  FKGA--GGPLLGLLTWPTTDDASIYMTENGER----------RFYSTGDNEIENPFFNVN 418
              G     PL+GL  +P  +  S Y  EN ER           +++  ++  +NP++  N
Sbjct: 400  VSGGFYMNPLVGLYRFPRGEGLS-YYKENYERYDEDRKLNTQNWHTFTEDFEQNPYWIQN 458

Query: 419  KNTINNINNRYITNARLMVEPLEWLRFVGNAGFDFSSGKITMVRHPESAYGY--SRGGIF 476
            +    +   R + +    ++  +WL        D S+ K+    +  +A       G   
Sbjct: 459  RIQSKDARIRLLLSLSANLKVTDWLTLQARGNLDHSADKLRQKFYASTATALCGMNGRYI 518

Query: 477  DQSLDNTRNFNLQYYGEVN---RSFFNDKFNTNLKIGSAVNSQETYTQAVTGER--FLAP 531
            +     T     Q YG+V    +   ND F  ++ IG ++N + T +  +  +       
Sbjct: 519  EMDYQET-----QMYGDVMAMVKKQLND-FTLDVAIGGSINDRITNSTRIDSKNASLKYA 572

Query: 532  NLYSIENTDNTTHRGRNRL--SQRRLIGVFGNLTMDYDNILFVTLTGRNDWSSTL---PI 586
            N++++ N   ++    ++   +  +L  VF    + Y   +F+ LT RNDWSSTL     
Sbjct: 573  NVFNLANIVMSSSASIDQKIDAHYQLQSVFATAQIGYKEGVFLDLTARNDWSSTLAYTKY 632

Query: 587  ENRSFFYPSVSTSFIFTELEPFRGFNNVLSYGKLRGSWARVGKDANPYSIRAFLEPKSTT 646
            E + FFYPSV  SF+    + +      +S+ KLRG+++ VG    P+    +     T 
Sbjct: 633  EKKGFFYPSVGVSFL---PDKWVKMPEWVSFSKLRGAYSIVGNGVPPFI--TYPVSYVTA 687

Query: 647  GGGFGYGFTGPSPNLRPEMTTSYEFGTELKFSGNRLGIDATYFNKLSEDQIVQDMRLSYA 706
            GG        P   ++PEMT S E G E KF  +RLG++ TY+   + +Q  +   L+  
Sbjct: 688  GGEILASDAAPFAEMKPEMTHSVELGMEWKFLQHRLGLNLTYYRTDTYEQFFKLPALA-G 746

Query: 707  TGFILQAFNAGKMRTEGIELQLNASPVVNTDFTWDVLANFTHLWSELISLPTGVNEFYMS 766
              +  +  NAG +R +G E+ L+A+PV+  DFTW    NF+   ++++ L   + EF   
Sbjct: 747  DKYAYRYVNAGDIRNQGWEITLDATPVLTPDFTWKTSLNFSANKNKIVELHEELKEFVYG 806

Query: 767  DTWLYGNVRNGSVIGGPLTTLTGFDYQYNDAGQVLIDPNTGYPLRDLTEWK----IVGNR 822
             T    +     V GG +  + G  +  ++AG ++   +  Y    L E       VGN 
Sbjct: 807  PTSFSSSYAMKLVKGGSIGDIYGKAFIRDEAGSIVYGTDGDYKGLPLVEGDGNTVKVGNA 866

Query: 823  QPDFTVGLTNSFTYKNMSLSFLLDFRKGGDIYNATEHLLTARGLSMRTLDRETP--VVFD 880
             PDF +G  +SF+YK  SL FLLD+R GG++ + T+  +   G+S  T        V  +
Sbjct: 867  NPDFMLGWNHSFSYKGFSLYFLLDWRYGGEVLSQTQAEMDLYGVSKATAQARDKGYVSLE 926

Query: 881  GVMKDGLENTANPTPNTKVIDPSRDMNYWSTSYGLPEVNFIEKDINWVRLRDVTLNYNLD 940
            G     ++                  N      G+ E  +   D   +RLR+++L+Y+  
Sbjct: 927  GQQISDVKGFYK--------------NVVGGRAGVTE--YYMYDATNLRLREISLSYSFP 970

Query: 941  SDLLSRVKFIKSGSVFVTATDLFILTNYSGLDP 973
               + +   +K   +   A +L  L   +  DP
Sbjct: 971  RKWVQKTNCLKDLQLSFVARNLCFLYKKAPFDP 1003