Pairwise Alignments

Query, 1040 a.a., SusC/RagA family TonB-linked outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 984 a.a., outer membrane protein Omp121 (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  405 bits (1042), Expect = e-117
 Identities = 323/1018 (31%), Positives = 500/1018 (49%), Gaps = 93/1018 (9%)

Query: 81   QSREVPVGSQRVLNVQLSTDSQQLDEVVVTALGITREKKAIGYASQQVETEELVQNRQPN 140
            Q++EV +     L V L +D+QQ+DEVVVTA+GI R +KA+GYA+  V  E++ ++R  +
Sbjct: 2    QTQEVAIKPN--LKVVLRSDAQQIDEVVVTAMGIKRSEKALGYAATSVGGEKIAESRTSD 59

Query: 141  VLNAMQGKVAGVTISSTGGAPGQGTSIQIRGINSIDPTRPNQPLFVIDGILMDNST--ST 198
            V++++ GK+AGV ISST   PG   S+ IRG++S+  T  NQPL+V+DG+ ++NST  ST
Sbjct: 60   VMSSLAGKIAGVQISSTSSDPGASNSVIIRGVSSLSGT--NQPLYVVDGVPLNNSTVYST 117

Query: 199  FGQGTELRGMSNRLADLNPNDIESINILRGGAATALYGLQGVNGVVVITTKSGRQGEMRV 258
             G  +      N    +NP+D+ ++ IL+G AATALYG +  NGVV+ITTKSGR+ E  V
Sbjct: 118  DGLNSGY-DFGNGANAINPDDVANMTILKGAAATALYGSRAANGVVMITTKSGRK-EKGV 175

Query: 259  NFTSTAGIE--EVNKFPDIQDTYTQGYAG---EYDPTSFWPS-------WGPTVAEARQL 306
                  G++   V + P+ Q+ +  G+ G   E +  S+ P        WG     +++L
Sbjct: 176  GIEYNGGVQWSTVLRLPEFQNEFGMGWNGNHTELENGSWGPRFDGSMQLWGNVYNNSQKL 235

Query: 307  DP--THPDELYNHIEDAYERGHQFRNTISFSGGGEALSFFTSLSHLTHEGVLPFTDYQNV 364
             P    PD    +I+D ++ G ++ N++SF+G  +   ++ S S ++ +G++P TD  + 
Sbjct: 236  KPYVAMPD----NIKDFFDAGFRYSNSLSFNGATDKSDYYVSFSQISDDGMIP-TDADSY 290

Query: 365  SARLNAEARVSDK---IKIGGNFNYINSGGNRYNADRFNEMLS--YWSPR-------WDV 412
              +    AR S K   +    + NY     N     +   ML+  Y +PR        D 
Sbjct: 291  D-KYTFSARGSHKAGALTFSSSLNYAYQKNNFATTGQGLSMLNSLYQTPRDISIIGLEDQ 349

Query: 413  TDYVKPDGTMNT-YGNDNPIYAAATNQLEDEVNRFIGGLTFGYTPTDWLTFSYRIGLDTY 471
             D     G   T YG  NP Y       E E  RF G     Y    +  F+YR+GLDT 
Sbjct: 350  NDPFNTPGYYYTPYGVMNPYYILNNYLNEYESERFYGKFQLDYEFLKYFKFTYRMGLDTT 409

Query: 472  SDDRTRTAPGPRGLPDEQVLE----------DNDLGFVHEYTTRFRAINSTFIATLNKDF 521
            +    +  P    L  E                + G   E  TR R IN   +   N   
Sbjct: 410  TGQSDKGKPNLYALYYEGTPNGEGQGSSSPFSGETGQYSEQITRRREINQDIMVNFNMPV 469

Query: 522  GEDFSGTLRLGHDLYDRQAKSFGVVGEELAVFDYFRLSNARFLSTEEEEIEYR-LMGIFA 580
              DF+    +G +  +R+         +L +  +F L N+      E+ +E R LMG+F 
Sbjct: 470  N-DFNINALVGFNGNERKVSYQYSEVNDLTIPTWFNLKNSGKTPIVEQHMELRRLMGVFG 528

Query: 581  EASLDYKDFLFLTLTGRNDITSSLASSNRSFFYPSASISYLFSEHLE--LPAFINQSKLR 638
            +    +K+ L+LT+T RND +S+L   NRSFFYP  + S++FSE L   L   I   K+R
Sbjct: 529  QFEGSWKNMLYLTVTARNDWSSTLPKENRSFFYPGITGSFIFSELLNDNLQDVITFGKIR 588

Query: 639  LSYAQMGKDAQPYSISSGFA------PYPTLPTGYTGV---TRDELLGNPGLKPEYTNTF 689
             S+ + G DA  Y ++  +A      P+ +L     GV   +   +LG+  L PE T   
Sbjct: 589  ASWGKTGNDADVYMVNPVYAQSSNRIPFGSLTFPLGGVNAYSAGNVLGSNTLSPEMTTES 648

Query: 690  EAGLEMAFLDNRIGFDVTYYYSISKDQILNINVANTTGYILSAINAGEMRNKGIELVLNA 749
            E GL MAF  NR+ FDV+YY   +  QI ++ +   +GY    +N G++RN+GIEL+++ 
Sbjct: 649  EVGLNMAFFKNRLSFDVSYYNRNTDKQIFSLAMDPASGYTAQNMNLGKIRNRGIELLISG 708

Query: 750  TPVRTNNFTWDTKLIFSANDNKILEIPEGLDEIVYASQFGYVGSTVTLKLVEGQPYGNIY 809
            TP+RT +F+W+    F+ N +K++ +PE L  I   + +G  G T ++  + G P G   
Sbjct: 709  TPIRTKDFSWELTWNFTKNWSKVISLPEELGGI--TTIYGLNGGT-SMYAITGMPVG--- 762

Query: 810  GTHWKRYYGPGEEEDPRFVDESRPIVIGENGFPVRAPLASQKILGNSQPDWIGGFTNTFT 869
                  +     E DP    + R +V    G PV A  +   I G+    +  G +    
Sbjct: 763  -----VFKAQVAERDP----QGRIVVNSSTGLPVEA--SEFGICGDMNNKYQMGVSTNLK 811

Query: 870  YKNLSLTALLDARVGQEKYNQMD--NFFAAFGIAEYTENRNQTVVFPGVLEDGTPNTKEV 927
            YK +SL    D R G   Y++    N+F    I     +RN  +V   V  +   N + V
Sbjct: 812  YKGISLGIDFDIRQGGVMYSRTKDINYFTGNAIQTAYNDRNPLIVPNSV--NKIVNGENV 869

Query: 928  WLGQGVGPDGVDYGNGYYRNYYRGVSENFVEDASWVRLRSLTLNYSLPQKWFESIFIRNA 987
               +   P        Y+ +    +   F+ D S+V+LRS+ L + LP++W      +  
Sbjct: 870  TYVENTTPITSSNIYKYWGDGGSDMGSCFLVDKSYVKLRSVVLGWDLPKRWLAKTPFQAV 929

Query: 988  SVSLTGNNL--WLSTDYKGYDPE-TSFSPSGSNVDGFSG--FTYPAVRSYLFTLNVGF 1040
             VS  GNNL  W  +     DPE TSF   G++++G  G     P+ R + F L V F
Sbjct: 930  KVSAYGNNLFVWTPSSNTFIDPEMTSF---GNDLEGNYGEYTANPSSRRFGFNLMVKF 984