Pairwise Alignments

Query, 546 a.a., chemotaxis protein CheA from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 937 a.a., hybrid sensor histidine kinase/response regulator from Rhodopseudomonas palustris CGA009

 Score =  258 bits (660), Expect = 5e-73
 Identities = 135/388 (34%), Positives = 230/388 (59%), Gaps = 14/388 (3%)

Query: 150 SELIYIQIKKLDHMMNLVGELMIDRDRILSISRDLNNDELKSVSSHLYRITEDLQYSVMD 209
           ++ I + +  L+H+M +V EL++ R+++L ISR   ++E K     L  +T +LQ  VM 
Sbjct: 254 NQSIRVNVDTLEHLMTMVSELVLTRNQLLEISRRHEDNEFKVPLQRLSTVTAELQDGVMK 313

Query: 210 ARLVNIGSLFNKFPRIVRDIATAEKKDVDLKLTGQDIQIDRNILQIITDSLLHLVRNAIT 269
            R+  IG+ + K PRIVRD+A    K ++L++ G D ++DR +L +I D L H+VRN+  
Sbjct: 314 TRMQPIGNAWQKLPRIVRDLAAELGKQIELEMHGADTELDRQVLDLIKDPLTHMVRNSAD 373

Query: 270 HGLETPEDRKKKGKEPVGNLTLSAQSDRDNVVIRLQDDGKGIDLRKVKKTAVERQLVSAD 329
           HGLE PEDR + GK   G + LSA  +  ++VI + D+G+G+D  ++K  A+   LV+  
Sbjct: 374 HGLEKPEDRARAGKPEQGTIRLSAYHEGGHIVICIADNGRGLDTERIKAKALANGLVTEA 433

Query: 330 VAKGLADNELLSFLFEPGFSTAKEVTEYSGRGVGLDVVKNAIDSIGGRISVDSEKGAGTT 389
             + + + ++  F+F PGFSTA  VT  SGRGVG+DVV+  ID IGG I V S  G G+ 
Sbjct: 434 ELEKMTEAQIHKFIFAPGFSTAAAVTSVSGRGVGMDVVRTNIDQIGGTIEVKSVAGEGSA 493

Query: 390 FILQLPTSIAVKGALLFEVDENYYAIPLIHTDQVV---ALDKDELHEVGDVLIANLKGET 446
             +++P ++A+  AL+ E   + +AIP +   ++V   A  +  +  + D  +  L+ + 
Sbjct: 494 ITIKIPLTLAIVSALIVEAGGDRFAIPQLAVVELVRARANSEHRIERIKDTPVLRLRDKL 553

Query: 447 VTVVYLNELLNAPEASMKLGDKTRLNGQVQN--IIIVSYNNRKLGLIVDKLYRQQDIVVK 504
           + +++L +LL   E +         N + +N  I++    ++  G++VD ++  ++IVVK
Sbjct: 554 LPLIHLKKLLGIDEGA---------NSEPENGFIVVTQVGSQTFGIVVDGVFHTEEIVVK 604

Query: 505 PLSKPLEQIDIYGGVTLLGTGKVCLVLD 532
           P+S  L  I ++ G T+LG G V +++D
Sbjct: 605 PMSTKLRHIGMFSGNTILGDGAVIMIVD 632



 Score = 50.1 bits (118), Expect = 4e-10
 Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 12/139 (8%)

Query: 12  FIAEALEYFDALNRHISTLEKEPEDEQTLAEIFRLLHNLKANSKAIGYLQISDVSHKLET 71
           F+ E  E  D ++  +   E+EP + + L  IFRL+H +K     +G  ++  ++H  ET
Sbjct: 8   FLTETFESLDTVDNQLVRFEQEPNNAKILDNIFRLVHTIKGTCGFLGLPRLEALAHAAET 67

Query: 72  AFSLIRNKELAFSEEVVTVLFDGIDMLGELIHNV----------DNPNYGEPDPVLLRNL 121
                R+  +  + E VT++   ID + +++  +          D    GE + + +R+ 
Sbjct: 68  LMGKFRD-GMPVTGEAVTLILTTIDRIKDILTQLEATQAEPEGEDGDLIGELERLSMRSP 126

Query: 122 DIIVENLSDST-IELAKVQ 139
           + I   L  +  +E+A+V+
Sbjct: 127 EEIAAELGGAAPVEVAEVE 145