Pairwise Alignments

Query, 471 a.a., DNA repair nuclease with dnaQ and GIY-YIG domains (from data) from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 229 a.a., DNA polymerase III, epsilon subunit (RefSeq) from Shewanella sp. ANA-3

 Score = 79.0 bits (193), Expect = 2e-19
 Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 2/160 (1%)

Query: 4   IVDIETTGGQPHQD-KITEIAIFIHDGEKIVDKYHTLINPERPIPYFITQLTGIKDDMVL 62
           ++D ET+G  P+Q  +  EI   + +  +I  ++  L+NP   I  FI   TGI + M+ 
Sbjct: 32  VLDFETSGLSPNQGARAIEIGAVLIEQGQITARFSELMNPGFRINSFIEDYTGISNQMLA 91

Query: 63  EAPKFYEVAKEIVEFTEGKVFVAHNVRFDYSFMKKEFADLGFTFQRKTLCTVRLSRSLIP 122
            A    EV     EF      VAHN  FD  F+  EF+ +G  +  +  C++ L+R L P
Sbjct: 92  HAAPCAEVMARFAEFIGKHHLVAHNATFDQRFLDAEFSQIGHQYPGQFGCSLLLARRLYP 151

Query: 123 GLPSYSLGKLCNSIDIPLS-QRHRAIGDAEATALLFDKLI 161
              ++ L  L     +P +   HRA+ DAE T  L+ +++
Sbjct: 152 EAINHQLATLVRHKQLPTNGTYHRALADAEMTGHLWLRML 191