Pairwise Alignments

Query, 225 a.a., DNA-binding response regulator from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 227 a.a., Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain from Pseudomonas stutzeri RCH2

 Score =  144 bits (364), Expect = 1e-39
 Identities = 82/222 (36%), Positives = 134/222 (60%), Gaps = 4/222 (1%)

Query: 1   MKVLVIEDEQALKESIVAYLRQEGYTCDAADDYRSAQHKTATFRYACVVVDLNLPDGNGL 60
           M++LVIED + +  +++ YL  +GY  D A D  S  H  AT  Y  +V+D+ LP  +GL
Sbjct: 1   MRILVIEDNRDILANVLDYLELKGYVVDCAQDGLSGLHLAATEHYDLIVLDIMLPGIDGL 60

Query: 61  NIVRSLKENYA-DTGIIIISAKNALDDKITGLEVGADDYLTKPFHLSELNARLKSVLRRR 119
            + + L+E+   DT II+++A++AL D++ GL  GADDYL KPF LSEL AR+++VLRR 
Sbjct: 61  QVCKRLREDAGRDTPIIMLTARDALADRLQGLGAGADDYLVKPFALSELVARIEAVLRRS 120

Query: 120 NFNGQKVLRVGEVEVQPESAEASVAGKTLTLTRKEFDLLLYFVSNRNRVLTKESIAEYLW 179
             + +  L+VG+++   ++ +A+ AG+ L L      LL   +     V+ +E + E LW
Sbjct: 121 QGSRKNKLQVGDLQYDLDTLQATRAGQPLRLNPIGHKLLAILMQKSPAVVRREQLEEALW 180

Query: 180 GDHIEMLDSLDFVYTHIKNLRRKIVEAGGEDYIQTVYGLGYK 221
           G+ +   DSL    +HI  LR+ + +      + TV+G+G++
Sbjct: 181 GNDVPDSDSL---RSHIHQLRQVLDKPFATPLLHTVHGVGFR 219