Pairwise Alignments

Query, 232 a.a., tRNA pseudouridine(55) synthase from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 301 a.a., tRNA pseudouridine synthase B from Phaeobacter inhibens DSM 17395

 Score =  157 bits (396), Expect = 3e-43
 Identities = 91/214 (42%), Positives = 129/214 (60%), Gaps = 6/214 (2%)

Query: 11  LLINKPLDWTSFDVVKKVRNTIRVKKVGHAGTLDPLASGLLILCTGKFTKRIDEIQGQEK 70
           L+++KP   TS  VV KVR     KK GHAGTLDP A+G+L +  G+ TK +  I    K
Sbjct: 14  LVVDKPAGLTSTAVVNKVRWAFDAKKAGHAGTLDPEATGVLAVALGEATKTVPYITDALK 73

Query: 71  EYTGIIRLGEVTPSYDRETEVTETRDITHLTAEDIKAAAHTFVGAIEQIPPIYSAVQIDG 130
            YT  +RLG+ T + D E EV   R  T  + ++I AA   F+G I Q+PP +SAV+IDG
Sbjct: 74  AYTFTVRLGQATNTDDAEGEVI-ARSETRPSDDEIVAALPQFLGDIMQVPPKFSAVKIDG 132

Query: 131 KRAYDLARKGKEVELKPRAVTIHAFEITSINGPE---VAFKVVCSKGTYIRSLAHDLGQK 187
           +RAY LAR G+E+EL  R + +   E+  ++ P+   V  ++ C KG Y+RS+A DLG  
Sbjct: 133 QRAYKLARDGEEIELAARPLWVE--ELILVDRPDDDHVVLEMTCGKGGYVRSIARDLGAA 190

Query: 188 LGVGGHLSKLERTRIGEYKLEDALTIEDIVAIRK 221
           LG  GH+  L RT  G +  ED +++E +  + K
Sbjct: 191 LGCHGHVKCLRRTWSGPFDAEDGISLETLDEMAK 224