Pairwise Alignments

Query, 260 a.a., 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 272 a.a., ribosomal RNA small subunit methyltransferase A from Sphingomonas koreensis DSMZ 15582

 Score =  116 bits (291), Expect = 4e-31
 Identities = 92/260 (35%), Positives = 129/260 (49%), Gaps = 21/260 (8%)

Query: 8   KHLGQHFLVDQNIAMKIVEQLTLPGNVP--DVLEIGPGMGVLTKYLLQHKEYRTTVVDID 65
           K LGQ+FL D  +  +I     +PG++   +V E+GPG G LT+ LLQ    + T V+ D
Sbjct: 20  KALGQNFLFDSQLLDRIAR---VPGDLEGREVFEVGPGPGGLTRALLQAGA-KVTAVERD 75

Query: 66  RESIAYLQQHFPELGER------IISADFLKTDLSTLFPGRFAIIGNFPYNISSQIFFKV 119
           R  I  L     ELGE       +I  D L+ D  +LF G+  I  N PYNI + +    
Sbjct: 76  RRCIPALA----ELGEAFPGKLTVIEGDALEVDAPSLFAGKPHIASNLPYNIGTALTVGW 131

Query: 120 LEH--RDVVPEVVCMIQKEVAERLASPPGSKAYGILSVLLQAFYTIDYKFTVSEHVFNPP 177
           L    +     +  M QKEVAER+ + PG+ AYG L+VL Q   +      V    F PP
Sbjct: 132 LSAIWQPWWASLTLMFQKEVAERIVAAPGTGAYGRLAVLAQWRSSAKIAMPVHRSAFTPP 191

Query: 178 PKVKSAVIGLVRNNVEKLACDEKMFHQVVKQSFGTRRKTLRNSLRIYNLPPEVLAQPVFD 237
           PKV SAV+ +V    E       +  ++   +FG RRK LR SL+      E       D
Sbjct: 192 PKVMSAVVHIVPGE-EPAGVKLAVLEKLTGAAFGQRRKMLRQSLKAMPGAVEAAESIGID 250

Query: 238 --KRAEQLSVQDFIELTQLI 255
             +RAE +SV +F+ L + +
Sbjct: 251 PTRRAETVSVDEFVALARTL 270