Pairwise Alignments

Query, 260 a.a., 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 309 a.a., 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA from Bifidobacterium breve UCC2003

 Score =  122 bits (306), Expect = 9e-33
 Identities = 87/275 (31%), Positives = 140/275 (50%), Gaps = 23/275 (8%)

Query: 2   SNVRPKKHLGQHFLVDQNIAMKIVEQLTLPGNVPDVLEIGPGMGVLTKYLLQHKEYRTTV 61
           + + P K  GQ+F++D     +IV +  +  N   V+E+GPG+G LT  +L+      T 
Sbjct: 24  AGISPTKKFGQNFVIDPGTVRRIVREADVTTN-DHVMEVGPGLGSLTLAILETGA-TMTA 81

Query: 62  VDIDRESIAYLQ----QHFPELGER--IISADFLKTDLSTL--FPG--RFAIIGNFPYNI 111
           V+ID      L     +  PE  +R  +++ D L      +  F G   F ++ N PYN+
Sbjct: 82  VEIDPPLAERLPRTVAEFMPEAADRLTVVNRDALTVTPDNVPDFNGDTSFTLVANLPYNV 141

Query: 112 SSQIFFKVLEHRDVVPEVVCMIQKEVAERLASPPGSKAYGILSVLLQAFYTIDYKFTVSE 171
           ++ I   +LE  D +   + M+QKEVA+RLA+ PGSK YG  SV L  + T +   T+  
Sbjct: 142 ATPILLTLLERFDSLGSFLVMVQKEVADRLAAKPGSKIYGTPSVKLAWYGTAERVGTIGR 201

Query: 172 HVFNPPPKVKSAVIGLVRNNVE--------KLACDEKMFHQVVKQSFGTRRKTLRNSLRI 223
           +VF P P V SA++   R   +        K + D ++  +++  +FG RRKTL  +L+ 
Sbjct: 202 NVFWPAPNVDSALVKFTRYAADDTQAPSHGKSSADRELVFRLIDAAFGQRRKTLHAALKT 261

Query: 224 YNLPPEVLAQPVFD--KRAEQLSVQDFIELTQLIE 256
             +P E  A    D  +R E L+V +F  L   ++
Sbjct: 262 I-VPAEAFAAAGIDPTRRGETLTVTEFAALAAAVQ 295