Pairwise Alignments

Query, 848 a.a., ATP-dependent helicase HrpB from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 827 a.a., ATP-dependent helicase HrpB from Pantoea sp. MT58

 Score =  556 bits (1433), Expect = e-162
 Identities = 344/842 (40%), Positives = 487/842 (57%), Gaps = 43/842 (5%)

Query: 12  DLPVKEALPRLLQVLNTSNRAVLEAPPGAGKTTLVPLALLEADWRGDGKILVLEPRRLAT 71
           DLPV   LP +L  L  +++ +L AP GAGK+T +PL LL+      G+I++LEPRRLA 
Sbjct: 16  DLPVSVVLPDILAALRDASQILLAAPTGAGKSTWLPLQLLQHAAL-PGRIIMLEPRRLAA 74

Query: 72  RAAAERMADLLGEPVGQTVGYWVRMDHKVSRKTRVEVVTEGILTRIIQDDPALEGVAAII 131
           R  A+R+A+ LGE  G TVG+ +R +  V  +TR+EVVTEG+LTR++Q DP LEGV+ +I
Sbjct: 75  RNVAQRLAEQLGEQPGATVGFRMRGESCVGPQTRLEVVTEGMLTRMLQHDPMLEGVSLVI 134

Query: 132 FDEFHERNLQADLGLALALDAQAVLRPDLRLLVMSATLDATAIGQWL-QAPVVQSEGRLF 190
            DEFHER+LQADL LAL LD Q  LR DL++++MSATLD   +   L  AP + SEGR +
Sbjct: 135 LDEFHERSLQADLALALLLDVQQGLREDLKIMLMSATLDNARLAALLPDAPFIVSEGRSY 194

Query: 191 PVQTHFLSPAEVAAAGNYPSQRLATLTPKAIRQALSQEAEGDLLVFLPGMGEIKKVAQQL 250
           PV+  +        A   P+ R      + + Q L  EA G LL+FLPG+ EI++V ++L
Sbjct: 195 PVERRY--------ASLNPNVRFEEAVAREVAQLLRDEA-GSLLLFLPGVAEIERVKREL 245

Query: 251 ENTLGPAIELHLLHGDLPLSKQVAAIQPSPKGKRKVVLATSIAETSLTIEGVTIVVDGGF 310
           E+ +   ++L  L+G LPL+ Q  AI P+  G+RKVVLAT+IAETSLTIEG+ +VVD   
Sbjct: 246 ESRISDDVDLTPLYGALPLAAQRRAILPAAAGRRKVVLATNIAETSLTIEGIRLVVDSAL 305

Query: 311 ARVPRFTPRTGLTTLATVPVSQAGADQRRGRAGRLGPGVCYRLWSTADQMQLPPRQSPEI 370
            R   F  R+G+T L T  +SQA   QR GRAGRL PG+C  L       +   +  PEI
Sbjct: 306 ERSALFDARSGVTRLQTQRISQASMIQRAGRAGRLMPGLCLHLLPQEQASRAAAQSEPEI 365

Query: 371 LDADLTGLVLELALWGVKDATTLNWLDSPPAAALALAKDLLQRLEALDAAGNPTPHGKAL 430
           +++DL+ L L+L  WG  +   L WLD PPA  L  AK  L RL ALD+ G     G+ +
Sbjct: 366 VNSDLSSLWLDLLQWGCTEPHQLQWLDQPPARNLDAAKQQLTRLGALDSNGLLNTLGRRM 425

Query: 431 ASLGIHPRLGHLVMR-GHELGFGATACALAALLSERDVLKPLQLGWGEGIPDLQLRLELI 489
           A LG  PRL  ++   G E    A+A  L A+L +     P + G  +      LR  L 
Sbjct: 426 AQLGCDPRLAAMLCAAGDEPDAVASAALLVAILED-----PPRSGSAD------LRDALH 474

Query: 490 AGKSPVTPGFVVDENALRRVKEQAQNLRQRLRDATGNLHPELAGLLTALAYPDRLAQR-E 548
             +SP               + +AQ  +QRL+   G +  +    L A+ + DRLA+R +
Sbjct: 475 RPQSPW--------------QRRAQQWQQRLKIRGGRVDEDRFAYLLAVGFGDRLARRRD 520

Query: 549 APGRVRLVSGQRASLATE--LFGEAEFYSIAHLDLGKQP--RILLAAPLAKSDLLEHFSE 604
             GR +L +G  A L  +  L       + A L     P  R+LLA P+    L +    
Sbjct: 521 QSGRYQLANGLGARLDEQDGLTRNEWLIAPALLQGSTTPDARMLLALPVDIETLCQQQPA 580

Query: 605 QVEVLQEVRWHEGSQQVVARHLTRLGALLVEESTVSKPDADKVAAALLQALQEKGVERLP 664
            +E   EV W E    + A    ++GAL+++   +++P+   + AA+L+ + EKG+  L 
Sbjct: 581 LIERRTEVEWDEEKGTLRAFRREQIGALILKTQPMARPEPAVLHAAMLRWIAEKGLSVLG 640

Query: 665 WSEEALRTRQRLAFLHRLEPE-NWPDTSDAALAASMDSWLAPHLHGLRTLDQVARLDFKE 723
           W+ +A + R R+    +  PE +WP T D +L   +  WL P +  +R L  +  ++   
Sbjct: 641 WTPDAEQLRLRIQCAAQWLPEESWPATDDESLLKILPQWLLPQMSAVRDLRSLQAVNLTT 700

Query: 724 ILLAELAWEQRQEMERLAPSHLQVPSGSRIALDYSDAASPVLAVRLQEVFGLLDTPRVGG 783
            LL  L W QRQ ++ + P+H  VP+GSR+ + Y     P LAVR+QE+FG    P V  
Sbjct: 701 ALLHLLTWSQRQRLDTVLPTHYTVPTGSRLPIRYDADKPPALAVRIQEMFGEATNPAVAE 760

Query: 784 GKVPLLLHLLSPASRPVQVTRDLRSFWSNGYFEVRKDLRGRYPKHHWPDDPLTAPPTRGT 843
           G++PL+L LLSPA RP+Q+TRDL +FW   + EVRK+++GRYPKH WP+DP  A PTR T
Sbjct: 761 GRIPLVLELLSPAQRPLQITRDLAAFWRGAWPEVRKEMKGRYPKHPWPEDPANALPTRRT 820

Query: 844 KK 845
           KK
Sbjct: 821 KK 822