Pairwise Alignments

Query, 815 a.a., ATP-dependent helicase HrpB from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 818 a.a., ATP-dependent helicase HrpB from Sphingomonas koreensis DSMZ 15582

 Score =  478 bits (1230), Expect = e-139
 Identities = 307/815 (37%), Positives = 447/815 (54%), Gaps = 33/815 (4%)

Query: 9   DLPVREIIPAVREHLAAQNTLIVNAPPGAGKSTLLPLAILDEVWLTGQKIVMLEPRRLAA 68
           DLP+  ++P +   L + +  ++ APPGAGK+T +  A+L E W  G+ I++L PRRLAA
Sbjct: 3   DLPIHAVLPDLLAALRSASNAVLVAPPGAGKTTAVAPALLIESWCAGE-ILLLSPRRLAA 61

Query: 69  KTIAERLAQLLGEEVGQSVGYRIRFETRISERTRIEVVTEGILTRMIHSDRALTGIGIVI 128
           +  AER+A L GE VG++ GY  R ++R S +TR+ VVTEGI    I +D  L G+  V+
Sbjct: 62  RAAAERMAALAGEPVGKTFGYATRMDSRRSAQTRVTVVTEGIFVNRIQADPELAGVSAVL 121

Query: 129 FDEFHERSIHADVAMALSREAQHTLRPDLRIMVMSATLDMPQLTSLL-KAPVAQSMGRQY 187
           FDE HERS+ +D  +AL+ +AQ  LRPDLR++ MSATLD  + ++L+ ++PV +S GR +
Sbjct: 122 FDEVHERSLDSDFGLALALDAQAALRPDLRLVAMSATLDGARFSALMGESPVIESEGRSH 181

Query: 188 PIETHYTGDADDRMLPEMTAKVIKQAAQEQEGDILVFLPGEGDIRKVETILRRELRNFQI 247
           P+E  + G A +  + E  A  I+QA +E +G IL FLPG  +I +    +  ++    +
Sbjct: 182 PLELRHLGRAAEARIEESVAGAIRQALRETDGGILAFLPGVAEIERTAERIG-DVPGIAL 240

Query: 248 HPLFGMLPFGKQYAAIMPDRQGRRKVVLATSIAETSLTIEGISVVVDTGFGKTSRFDPKS 307
           H L G L    Q AAI PDR+GRRK+VLATSIAETSLT++GI VVVD+G  +  R+D  +
Sbjct: 241 HKLHGSLDPAAQRAAIAPDREGRRKIVLATSIAETSLTLDGIRVVVDSGLARRPRYDRAA 300

Query: 308 GLSRLETVRISKDAADQRAGRAGRLGPGTAYRMWSKTTHERMAPHRTPEIMEADLSSLVL 367
           G++R+ T R S+ A  QRAGRA R GPG AYR+W       +     PEI+EADLS+L L
Sbjct: 301 GMTRVVTERASQAAVTQRAGRAARQGPGFAYRLWEAAATAGLPRFDPPEILEADLSALTL 360

Query: 368 DMAQWGITDIRGLTWLNPPPRAALQYATDMLHQLQALE-HGRITEHGKRMHALPCHPRIA 426
           D A WG+ D R L WL+PPP AA+Q A   L  L+AL+  GR T HGK +  LP  PR+ 
Sbjct: 361 DCALWGVADPRALNWLDPPPEAAVQEARARLGALEALDADGRPTAHGKAIAQLPLPPRLG 420

Query: 427 HMLLKAEETDQVALASDIASVLEERDPLDRNAGIDINLRVEALRRYRKEQGQGKRFSKIE 486
           HML++A E      A+ IA +L ER       G D +L    LRR++ E+GQ  R     
Sbjct: 421 HMLVRAGELGLAQTAAQIAVLLGERG----LGGPDADLE-HRLRRWKTERGQ--RAENAR 473

Query: 487 KIARSYRSLF----EVDPENGSFDDYETGVLLAHCYPERIAYARPGNNAQFQLASGQYAS 542
           ++A  +  L         E GS +     V LA  +P+RIA  R  +   +  A G+   
Sbjct: 474 RLAERWTRLVPGTRAAAIEPGSPEAVAACVALA--FPDRIAKRRDASGETWASAGGRGFR 531

Query: 543 AGHRDDLAHESWLAIAHLHAGTGDNPGRIFLASPLNPRDLAPL----VKQQESYHWDVND 598
                 LA   WLA+A           RI  A+P++   +  L    ++ +    +    
Sbjct: 532 LDPASSLARHEWLAVAETQGMAAG--ARILSATPIDAAGVETLFGHRIETRRHVRFVPAS 589

Query: 599 GELTASMDTRIGSIVLQSKPLPPPDEKHRIPAISEAIKLEGEHLLDFNEELTQWQNRVLS 658
           G + A+ + R+G+I L + P    D      A+ E ++   +H LD    L  W     +
Sbjct: 590 GRVEATRERRLGAIRLSNGPDTAADPDEIAAALLEGVR---QHGLD----LLPWSTNARA 642

Query: 659 LRKWRPAEGWPDVSTSTLLMTNWDWLRPHLSDIEHPDELMELELLPILEKKYLDEAQRER 718
           LR      G   +S   L     DWL P L+     D +    L   L+ +   +AQ++ 
Sbjct: 643 LRIRAAYAGLESLSDDALRADLDDWLAPALAGKRRLDAIAPEALTQALQNRLGWDAQKQ- 701

Query: 719 LEVLAPASINLLDGSSIELEYKAQGEQPKLEIRLQDILAWEESPTVDAGEMKVELHLLTP 778
           L+ LAPA +    GSS E++Y A+G  P +E+R+Q +      P +  G   V L L +P
Sbjct: 702 LDRLAPARLETPAGSSHEIDYAAEG-GPMVEVRVQALFGLATHPMLGDGTPLV-LSLTSP 759

Query: 779 ELKPITTVSDLASFWKGNYRVIKRQLEAVFPEVKW 813
             +PI T  DL  FWKG++  + +++   +P   W
Sbjct: 760 AGRPIQTTRDLPGFWKGSWADVAKEMRGRYPRHPW 794