Pairwise Alignments

Query, 1003 a.a., SusC/RagA family TonB-linked outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 1019 a.a., SusC/RagA family TonB-linked outer membrane protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  339 bits (869), Expect = 7e-97
 Identities = 301/1060 (28%), Positives = 463/1060 (43%), Gaps = 121/1060 (11%)

Query: 20   LMLVLLGQ---VAFAQSTRYTVTGTVTDARTKVPLPGVVVKFQNSNSATATDANGKYSLT 76
            L+L+ LG    +A A + + TVTG VT A    PLPGV ++ + S   + T+A+G YS+ 
Sbjct: 5    LLLIFLGTFLLLAHAIAQQITVTGKVTSADG--PLPGVSIRVKGSTVVSQTNADGNYSIK 62

Query: 77   TTQGAGTYNLTFSYIGFKPETKPVTLGSAATVVVDAQISEDVVGLDEVVVTGTSVATSKK 136
              +      L FS+IG+K   + +        V++  +  D   LDEVVVT  +VA  +K
Sbjct: 63   ALKNE---TLQFSFIGYKTVERVI-----GNTVINIVLVNDASNLDEVVVTAFNVAQDRK 114

Query: 137  QLGNAISTVSAASLQNSVATSVDQALAGKVAGAQISQNSGNPAGGISVRLRGTSTVVGSG 196
             +  A   V +  ++ S   ++  AL GK+AGA I+ + G P  G ++ LRG +++ G  
Sbjct: 115  SINYAFQNVKSKDIEESRQQNIVNALQGKIAGAVITSSGGGPGEGSAIILRGGTSLDGDN 174

Query: 197  DPMYIVDGVIINNNSPELIDLGGYAQ-------------NRLVDINPNDIERIEIIKGAA 243
             P+++VDGV ++N+S       G                NR  DINP+DIE + ++KG A
Sbjct: 175  QPLFVVDGVPLDNSSFVESTAPGAGSAFNGVLGRSVGTPNRASDINPDDIESVTVLKGPA 234

Query: 244  AAAIYGSRASNGVVQIFTKRGKAGKPKIAASTQFRVSEVRKTLDYNDYP-------FRFV 296
            AAA+YG +A NG + I TK+GK G   I  +  F    V +  +            +   
Sbjct: 235  AAALYGLKAGNGAIIITTKKGKTGSTTITYNNVFSWDNVIRLPETQSIYKQGTAGIYNLT 294

Query: 297  DTDPGNLTQEPVQR-YDFQDKIFRTAFGTENNLSVSGGSENTQYYLSGNYLSNQGIIDNT 355
              D       P +  YD     F T     +NLSVSGGS+   +  S +  +  G++  T
Sbjct: 295  SRDSYGSEFAPGETIYDNLGDFFVTGKSQTHNLSVSGGSDKYTFRFSASNANQNGVVPQT 354

Query: 356  NFNRGGARIRIDQTLNNWMSVSVGANYVLSTSEEIPNG-GLSEAYGALTGFIFS------ 408
            ++ +   R+      +   + +  ANY+ +T      G GL   +G   GF+ S      
Sbjct: 355  DYGKTSVRLSGSAIASEKFTFTGSANYMRTTGRRPLQGPGL---FGGTGGFLVSIFNWPK 411

Query: 409  ----NNYINPEPVNGVFPSTAPTSILRRTNPLEAIERFKFGQRTNRFIGDLQLMLTPIPN 464
                 +Y++P+       ++A        NP   I++       +RF+G+      P   
Sbjct: 412  NDNMKDYLSPDGTRRRLLASATGDT---DNPYFTIDKNPQTDSNDRFLGNAGAEYRPFKW 468

Query: 465  LNINYTLGYDNATQIATGFIPVGNTTPSYDTGYSRRADRTTYLLNNDLNASYRATLADWL 524
            L +NYTLG D  T+       VG + P+   G   +   T   L ++L  S   +  D+ 
Sbjct: 469  LKVNYTLGTDLYTERIQSVRAVGTSLPNNFNGGIGQTVNTFQSLTSNLLISAEQSFGDFS 528

Query: 525  ESTTGVGATVQVDKVYATGITATQLGPIAET--------TSNGATIISSELRSDINIFGF 576
             S   VG  V   K      T   LG I +         T N + I  + L+  I  FG 
Sbjct: 529  TSLL-VGNAVDQTKFS----TVDYLGLIFQNPDFISVNNTVNRSLIERNSLKRIIGAFGS 583

Query: 577  FAQQTFGIGDRLFLTGAGRYDVSSVFGEDNRWQFYPKVSGSYLISNEKFWEGLSQVIPIL 636
            F          +FL   GR D SS     NR  FYP VS  Y  +     E  ++ +   
Sbjct: 584  FNADW---KKTIFLNLTGRNDWSSTLPTKNRSFFYPSVSLGYEFTKSLNLES-NKWLSYG 639

Query: 637  KVRASYGQAGNLTAIGAFDRYTNYVPV-SLPGLPGVISSTLLGNSG-IKPERQVETEIGA 694
            K+R SY   G  T+      Y    P+ S   + G       GN+  +KPER+   E G 
Sbjct: 640  KLRLSYADVGKDTS-----PYRVESPLQSNTFIGGGFRYGFFGNNPELKPERRTSFEAGL 694

Query: 695  DMSFLNGRLGLEFSYYHKDVKDLLLFVNLTPSSGFLNQYRNVGTLTNKGFELMLTGAPVQ 754
            D+ F + RL L+ + Y    KD ++   ++ ++GF+ QY N G + N+G ELML+G P++
Sbjct: 695  DLQFFDQRLRLDATVYRDRTKDQIIAPRVSQATGFILQYINGGLVENRGVELMLSGTPIR 754

Query: 755  NENFKWTSTVTFSKNKNEVNNIPGGLLLFPGGFSQV------AAVDGYPLGAFYSTYFAR 808
            N+NF W     F+ NKNEV ++P  L +     + +      A+  G  L +  +T + R
Sbjct: 755  NKNFNWDINFNFASNKNEVLSLPYPLTIVRNSDASIINVAEGASYPGKSLTSISATDYIR 814

Query: 809  NPDGSLLLTPKGLPQAEKEGRDPETGQPTGATSKKVIGDPNPDWTGSFINELTVGKGFSF 868
            +P+G +++                 G PT  T     GD  P +T    N     K   F
Sbjct: 815  DPEGRIII--------------DANGYPTFNTLFTYAGDRAPKFTMGLNNTFRY-KNLEF 859

Query: 869  RTQFDAAYGFEVFN----------FTRRVGERDFYGGLAGYEPELRGEVPKGTSAALF-- 916
                D   G +V N           + +  ER+      G      G     T       
Sbjct: 860  SFLVDIRKGGDVINGNEWELVRSGLSMQTAERNKPVIFEGVVKNADGSFSPNTKQVELTQ 919

Query: 917  GIFEN--------YIEDGSYIKLRELSVAYDFKPAFLGG--NNMRLTLAGRNLFSIDDYS 966
            G FEN        +IEDGS+I+LR  ++ Y     +L    + + L + GRNL  + +YS
Sbjct: 920  GYFENNLAAVGTAFIEDGSWIRLRSATINYTLNRKYLPKFFSTLNLFVTGRNLVLLTNYS 979

Query: 967  GYDPEVNAAG---QTTAVRGFDFVEVPIPRTYALGVNVSF 1003
            G DPEV  +G   +     G D+  VP  R + LG+ V F
Sbjct: 980  GIDPEVGVSGAGVRGGGSAGLDYGGVPSRRGFDLGLKVGF 1019