Pairwise Alignments

Query, 1003 a.a., SusC/RagA family TonB-linked outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 1070 a.a., SusC/RagA family TonB-linked outer membrane protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  345 bits (885), Expect = 1e-98
 Identities = 310/1111 (27%), Positives = 492/1111 (44%), Gaps = 160/1111 (14%)

Query: 12   LKVTLMCALMLVLLGQVAFAQSTRYTVTGTVTDARTKVPLPGVVVKFQNSNSATATDANG 71
            +K  L    +L+ +   A AQ    T+TGTVT A  K+P+PGV V+ + +     TDANG
Sbjct: 1    MKKLLQSLFILMFVAISAIAQER--TITGTVTSAEDKLPIPGVSVRVKGTQVGAVTDANG 58

Query: 72   KYSLTTTQGAGTYNLTFSYIGFKPETKPVTLGSAATVVVDAQISEDVVGLDEVVVTGTSV 131
            KYS+    G+    L FSYIG+  ++K  T+G A ++ V   +S+  V L +VVVT  ++
Sbjct: 59   KYSINVPSGSSA--LEFSYIGYVLQSK--TIGGANSINV-VLVSDSKV-LTDVVVTANAI 112

Query: 132  ATSKKQLGNAISTVSAASLQNSVATSVDQALAGKVAGAQISQNSGNPAGGISVRLRGTST 191
               K+ LG +  T+++ +L  S +TS   A+ G+V G  IS +S  P     +  RG ++
Sbjct: 113  KREKRTLGYSAPTITSEALSQSGSTSPLTAMVGRVPGMNISSSSNTPGSSTRIVFRGGTS 172

Query: 192  VVGSGDPMYIVDGVIINNNSP-------ELIDLGGYAQNRLVDINPNDIERIEIIKGAAA 244
            + G+   + ++DGV ++N+S          +D G    NR  DI+P+DIE I  + G AA
Sbjct: 173  IAGNNQALIVIDGVPVDNSSVIGGADSRSSVDFG----NRANDIDPDDIESITPLLGPAA 228

Query: 245  AAIYGSRASNGVVQIFTKRGKAGKPKIAASTQFRVSEVRKTLDY-NDYPFRFVDTDPGN- 302
            AA+YGSRASNG VQI TK GK GK +I  +T    S + K  D+ N+Y   +     G+ 
Sbjct: 229  AALYGSRASNGAVQITTKSGKKGKTQITFNTSNTFSSILKLPDFQNEYGQGYATDYDGSG 288

Query: 303  --------------------LTQEPVQRYDF--QDK-----------IFRTAFGTENNLS 329
                                ++QE  Q  D   Q K            F+T F T+NN+S
Sbjct: 289  VKEYFNDSQENWSWGAPFTGISQEWGQSIDGVRQSKPYSAQTDNVRNFFKTGFVTDNNVS 348

Query: 330  VSGGSENTQYYLSGNYLSNQGIIDNTN--FNRGGARIRIDQTLNNWMSVSVGANY----- 382
             SGG++ + +YL+ N L++ GI       +N+ G R       ++  S  +  NY     
Sbjct: 349  FSGGTDRSTFYLALNTLNSDGIFPGAQDVYNKYGVRFNGKTDFSDKFSAGISFNYNKINA 408

Query: 383  ---------------VLSTSEEIPNGGLSEAYGALTGFIFSNNYINPEPVNGVFPSTAPT 427
                           VL T  +IP   L +      GF +++        NGV  +    
Sbjct: 409  RQVAGGQNDNSVFDNVLQTPRDIPLDKLGDLNNKYNGFGYTD-------ANGVLHADQYG 461

Query: 428  SILRRT-NPLEAIERFKFGQRTNRFIGDLQLMLTPIPNLNINYTLGYDNATQIAT----- 481
                 T NP   +E F      NR  G++ L   P+  L     +G D  ++        
Sbjct: 462  YYGSYTLNPYYILENFTNDDAINRITGNVNLDYKPLSWLTFQDRIGTDTYSERRRQLTPK 521

Query: 482  -GFIPVGNTTPS----YDTGYSRRADRTTYLLNNDLNASYRATLADWLESTTGVGATVQV 536
              F P+   T       + GY       T ++N DL A+   T +D  + +  VG  ++ 
Sbjct: 522  FSFSPIDQVTNQGTHVSNGGYQIDQYNVTEIVN-DLMATASHTFSDDFKGSLMVGHNIR- 579

Query: 537  DKVYATGITATQL--GPIAET-----TSNGATIISSELRSDINIFGFFAQQTFGIGDRLF 589
             +  +T  TAT    G +         SNG   + ++  S   + G +A       + LF
Sbjct: 580  QRTTSTNRTATNASAGLVVPDWYNLQNSNGPLNVITDNISQRRLVGVYADLNLAYKNYLF 639

Query: 590  LTGAGRYDVSSVFGEDNRWQFYPKVSGSYLISNEKFWEGLSQVIPILKVRASYGQAGN-- 647
            L    R D SS     N   FYP VSGS++ S        + ++   K+RAS  + GN  
Sbjct: 640  LEATARNDWSSTLPTQNNSFFYPSVSGSFVFSE---LIKPNNILSYGKLRASIAKVGNDT 696

Query: 648  -----LTAIGAFDRYTNYVPVSLP--GLPGVISSTLLGNSGIKPERQVETEIGADMSFLN 700
                 LT        + +     P   +  + + T LGN  +KPE     E+G ++SF N
Sbjct: 697  DPYQLLTTFAKGTIASGFGSTIFPFGNVAALQAGTTLGNPNLKPEITTAYEVGTELSFFN 756

Query: 701  GRLGLEFSYYHKDVKDLLLFVNLTPSSGFLNQYRNVGTLTNKGFELMLTGAPVQNENFKW 760
             R G++F+YY    K+ +L + +  S+G+     NVG + N G EL L G  V++ ++  
Sbjct: 757  NRFGVDFTYYKNKSKNQILAIPIPNSTGYGFSVINVGEVQNNGLELTLKGTAVKSTDWNI 816

Query: 761  TSTVTFSKNKNEVNNIPGGLLLFPGGFSQVA--AVDGYPLGAFYSTYFARNPDGSLLLTP 818
                T+ KN+N+V ++     +  GG S +A  A +G P G FY+     +  G  ++  
Sbjct: 817  ELFGTYYKNRNKVVDLGDVSQVVLGGVSGMAIVAAEGRPYGEFYAVTNQTDAQGRTIV-- 874

Query: 819  KGLPQAEKEGRDPETGQPTGATSKKVIGDPNPDWTGSFINELTVGKGFSFRTQFDAAYGF 878
                       D  +G P    + + +G  NP +  S+   +T  + ++    FD   G 
Sbjct: 875  -----------DAVSGLPLATPTAQYLGSYNPKFQASWGANITFKQHWNLNVLFDTKQGN 923

Query: 879  EVFNFTRRVGERDFYGGLAGYEPELRGEVP---------KGTSAALFGIFEN-------- 921
            ++F+ T+ +     + G++      R  +P          G S     +F N        
Sbjct: 924  KLFSRTKDILA---FVGVSAETGGQRFGLPFPNSVYLDANGNSVVNTNVFYNKQDYFPDL 980

Query: 922  ----YIEDGSYIKLRELSVAYDFKPAFLGG---NNMRLTLAGRNLF--SIDDYSGYDPEV 972
                 + DGS++KLR   ++Y F  A L     + + L + G NLF  +  +    DPEV
Sbjct: 981  NPGVNVIDGSFVKLRSAGISYSFNKAQLKSLPFSALSLGVFGNNLFIWTAKENRYVDPEV 1040

Query: 973  NAAGQTTAVRGFDFVEVPIPRTYALGVNVSF 1003
            N+ G T   +GFD+   P  R Y   + V+F
Sbjct: 1041 NSGGATNE-QGFDYTAQPSVRNYGFNLKVTF 1070