Pairwise Alignments

Query, 1003 a.a., SusC/RagA family TonB-linked outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 1029 a.a., SusC/RagA family TonB-linked outer membrane protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  345 bits (886), Expect = 7e-99
 Identities = 307/1079 (28%), Positives = 491/1079 (45%), Gaps = 141/1079 (13%)

Query: 12   LKVTLMCALMLVLLGQVAFAQSTRYTVTGTVTDARTKVPLPGVVVKFQNSNSA-TATDAN 70
            +K  L+C  M++ LG ++FA +    ++G VT A    P+PGV V  + S S  T +DA 
Sbjct: 1    MKKLLLC--MILSLGVISFAFAQGKVISGKVTSASG--PIPGVSVFVKGSPSTGTQSDAT 56

Query: 71   GKYSLTTTQGAGTYNLTFSYIGFKPETKPVTLGSAATVVVDAQISEDVVGLDEVVVTGTS 130
            G + LT ++ A T  + FS+IGFK +  P+   S  TV V+  + E+   L +VVV G  
Sbjct: 57   GAFKLTVSEDAKT--IVFSFIGFKTKEVPI---SGQTVNVN--LEEENNTLSDVVVVGYG 109

Query: 131  VATSKKQLGNAISTVSAASLQNSVATSVDQALAGKVAGAQISQNSGNPAGGISVRLRGTS 190
               +K+ +  ++++V +  L+N   TS +QAL GK AG QI+  +G    GI+VR+RG +
Sbjct: 110  TQ-NKRDVTGSVASVKSKDLENLPVTSFEQALQGKAAGVQIAAQNGKLGQGITVRVRGAA 168

Query: 191  TVVGSGDPMYIVDGVIINNNSPELIDLGGYAQNRLVDINPNDIERIEIIKGAAAAAIYGS 250
            +V    +P+YIVDG+ I +             + L D+N NDIE IE++K A+A+AIYG+
Sbjct: 169  SVTAGSEPLYIVDGIPITSGD---FSSTTAPTSALADLNTNDIESIEVLKDASASAIYGA 225

Query: 251  RASNGVVQIFTKRGKAGKPKI------AASTQFRVSEVRKTLDYNDYPFR---------F 295
            RASNGVV I TK+GK GK  I        ST     E      Y     R         F
Sbjct: 226  RASNGVVLITTKQGKVGKTLIQFNALGGISTPSNHREFLTAEQYVKIERRAGQGAANQDF 285

Query: 296  VDTDPGNLTQEPVQRYDFQDKIFRTAFGTENN--------------------------LS 329
            ++ D   L QE +  Y    +     +   NN                          L+
Sbjct: 286  LNGDYATL-QEALDDYSASVEARLNRYSAGNNDYQTYKVNTNWEAASFQDNPVTQQYDLN 344

Query: 330  VSGGSENTQYYLSGNYLSNQGIIDNTNFNRGGARIRIDQTLNNWMSVSVGANYVLSTSEE 389
            ++GG+E T++Y+ G  L   GI+   ++ R   R+ +   + +++ V V  N+  S +  
Sbjct: 345  LTGGNEKTKFYIGGQALDQNGIVIGNSYKRYSGRLNLTNKVTDFLEVGVNLNFSNSINNR 404

Query: 390  IPNGGL------SEAYGALTGFIFSNNYINPEPVNGVFPSTAPTSILRRT---NPLEAIE 440
            + N         S A   +T FI        +P +G+   T P +        NP  +++
Sbjct: 405  LSNDNAFSSPLQSVALSPITPFI--------DPRSGLISGTLPGAASNYPVYYNPFISVD 456

Query: 441  RFKFGQRTNRFIGDLQLMLTPIPNLNINYTLGYDNATQIAT---GFIPVGNTTPSYDTGY 497
               +     R IG     +     L  +     DN  Q      G +   NT  S   GY
Sbjct: 457  NAFYKATVYRTIGKAFANINIAKGLKFSTDFSIDNLNQNEESYYGSLTFRNTGTS--NGY 514

Query: 498  SRRADRTTYLLNNDLNA--SYRATLA----DWLESTTGVGATVQVDKVYATGITATQLGP 551
             +    +T+++N + N   SY A++     D++  T+   +T +   +      +     
Sbjct: 515  GQNI--STFVINANTNNFFSYNASIGKSAFDFVLGTSYQKSTTKYSTIEGQDFPSDSYIK 572

Query: 552  IAETTSNGATIISSELRSDINIFGFFAQQTFGIGDRLFLTGAGRYDVSSVFGEDNRWQFY 611
            +    +    +I++      +   +F +  +   +R  L  + R D SS FG +NR+ ++
Sbjct: 573  LGSAATK---VIATSNEGAFSFLSYFFRANYKYNERYLLGFSVRADGSSRFGTNNRYGYF 629

Query: 612  PKVSGSYLISNEKFWEGLSQVIPILKVRASYG-----QAGNLTAIGAFDRYTNYVPVSLP 666
            P  S +++ S E F +  S+ I +LK R SYG     + GN +A G F     Y      
Sbjct: 630  PAGSLAWIASEEDFLKQ-SETISLLKFRVSYGLTGNAEIGNYSARGLFSGTGAY-----G 683

Query: 667  GLPGVISSTLLGNSGIKPERQVETEIGADMSFLNGRLGLEFSYYHKDVKDLLLFVNLTPS 726
            GLPG I S +  N  +  E+  + +IG D   L  R+   F +Y K+  DLLL V +  +
Sbjct: 684  GLPGQIPSRI-ANPDLTWEKTKQLDIGFDFGILKNRITGVFDFYQKNTTDLLLDVPIPQT 742

Query: 727  SGFLNQYRNVGTLTNKGFELMLTGAPVQNEN----FKWTSTVTFSKNKNEVNNIPGGLLL 782
            +GF  + +N+G+L N GFEL      +  EN    FKW++ +T + N N++ N+ GG +L
Sbjct: 743  TGFSTKTQNLGSLKNTGFEL-----GINTENFVGAFKWSTAITGAINNNKITNL-GGQIL 796

Query: 783  FPGGFSQVAAVDGYPLGAFYSTYFA--RNPDGSLLLTPKGLPQAEKEGRDPETGQPTGAT 840
                 +  AA+ G P+G FY   +A   + +G  L        +    R   T       
Sbjct: 797  NSNEIN--AAISGQPIGVFYIPEYAGVNSANGDALYYLNTTDASGNVNRSTTT--DINQA 852

Query: 841  SKKVIGDPNPDWTGSFINELTVGKGFSFRTQFDAAYGFEVFNFTRRVGERDFYGGLAGYE 900
             +   G+PNP +T    N  +  K F     F    G ++FN     G+        GY+
Sbjct: 853  QRIFAGNPNPKYTFGLNNTFSY-KNFDLGIFFQGVKGNKIFN---AGGQYMSANASNGYD 908

Query: 901  PELR---------GEVPKGTSAALF-----GIFENYIEDGSYIKLRELSVAYDFKPAFLG 946
             +           G+V       LF     G    Y+ DGSY++L+ L++ Y F  + L 
Sbjct: 909  NQTADQMNYWDKPGDVTLVPEPRLFAGNGIGNSTRYLSDGSYVRLKTLTLGYTFPASVLT 968

Query: 947  G---NNMRLTLAGRNLFSIDDYSGYDPEVNAAGQTTAV-RGFDFVEVPIPRTYALGVNV 1001
                + +RL    +NL +I  Y G+DPEVNA  Q+T + +G DF   P PR  + G+N+
Sbjct: 969  KIKLSKLRLYATAQNLATITGYKGWDPEVNADYQSTNINQGVDFYSAPQPRVISFGINI 1027