Pairwise Alignments

Query, 1003 a.a., SusC/RagA family TonB-linked outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 1021 a.a., SusC/RagA family protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  328 bits (842), Expect = 9e-94
 Identities = 293/1028 (28%), Positives = 468/1028 (45%), Gaps = 100/1028 (9%)

Query: 38   VTGTVTDARTKVPLPGVVVKFQNSNSATATDANGKYSLTTTQGAGTYNLTFSYIGFKPET 97
            + GTV D +TK PL GV V+ + +     T+A G +S  T Q    Y L  SYIG++ + 
Sbjct: 30   LVGTVLDEKTKDPLIGVSVQIKGTTHVAQTNAQGIFSFITGQKF-PYTLVVSYIGYQKQE 88

Query: 98   KPVTLGSAATVVVDAQISEDVVGLDEVVVTGTSVATSKKQLGNAISTVSAASLQNSVATS 157
              V  GS   ++    + E+   L+E+VV G      +K L  AI++V    L++   +S
Sbjct: 89   LIVD-GSPVNIL----LKEENGQLNEIVVVGYGTQ-KRKDLTGAIASVKLDELKSLPVSS 142

Query: 158  VDQALAGKVAGAQISQNSGNPAGGISVRLRGTSTVVGSGDPMYIVDGVIINNNSPELIDL 217
             ++ L G V+G Q++Q SG P GG+SV++RG++++    DP+Y++DG  INN++    D 
Sbjct: 143  PERLLQGTVSGIQVTQTSGQPGGGVSVQIRGSNSITAGSDPLYVIDGFPINNDN-TAADA 201

Query: 218  G---GYAQNRLVDINPNDIERIEIIKGAAAAAIYGSRASNGVVQIFTKRGKAGKPKIAAS 274
            G   G   N +  ++  DIE I+++K A+A AIYGSR +NGVV I TK GK   P I   
Sbjct: 202  GVTNGAKINPMSFLSAEDIESIDVLKDASATAIYGSRGANGVVIITTKTGKPSNPSINYD 261

Query: 275  TQFRVSEVRKTLD-YNDYPFRFVDTDPG-----NLTQEPVQRY---------DFQDKIFR 319
              +    V +TL   N   +  +  D       NL    V  Y         D+Q   FR
Sbjct: 262  GYYGSQSVIRTLPLLNGAQWWALRKDAAKNSGKNLVIPSVSGYGLDTTGVGTDWQAAAFR 321

Query: 320  TAFGTENNLSVSGGSENTQYYLSGNYLSNQGIIDNTNFNRGGARIRIDQTLNNWMSVSVG 379
             A    +N+S+  GSE T++ LSGNY + +G++ NTNF R   R+ ID   N  + +   
Sbjct: 322  DAPVQNHNISILSGSERTRFALSGNYFNQEGVLQNTNFTRYAGRLNIDHEYNKRLRIFAS 381

Query: 380  ANYVLSTSEEIPNGGLSEAYGALTGFIFSNNYINPEPV-----NGVFPSTAP-TSILRRT 433
                 +T+   P              I  N  + P  +     +G F   +P  S L+  
Sbjct: 382  VIGSSTTANVAPAN------------IVGNLLLTPPSLPIYKNDGTFVVISPFESALQ-- 427

Query: 434  NPLEAIERFKFGQRTNRFIGDLQLMLTPIPNLNINYTLGYDNATQIATGFIPVGNTTPSY 493
            NP+ ++       +TNRF+G++    T    L      G D        ++P+       
Sbjct: 428  NPINSLYNQINQTKTNRFLGNVSAEYTIAEGLKAKILFGADVTDNKQNRYLPITTGEGQA 487

Query: 494  DTGYSRRADRTTYLLNNDLNASYRATLADWLESTTGVGATVQVDKVYATGITATQLGPIA 553
             +G +      T    N+   SY  T A+  +    VG T Q  K    G  A   G   
Sbjct: 488  LSGVATVGSLFTSSWLNENTLSYDKTFAEKHKINAVVGFTAQ--KSNTKGAVAEGAGFAT 545

Query: 554  E--TTSNGATIISSELRSDINI----FGFFAQQTFGIGDRLFLTGAGRYDVSSVFGEDNR 607
            +  T +N  T ++    S   I      +  +  +    R   T   R D SS FGE N+
Sbjct: 546  DDYTYNNIGTGVTQRPASSTAIQWALASYLGRVNYVFDGRYLATLTLRADGSSRFGEGNK 605

Query: 608  WQFYPKVSGSYLISNEKF---WEGLSQVIPILKVRASYGQAGN-----LTAIGAFDRYT- 658
            W ++P  +  + +++E F   W+ +SQ    LKVR S G  GN      +++G    Y  
Sbjct: 606  WGYFPSAAFGWNVTSESFAKEWKKISQ----LKVRLSAGYTGNQNIPPYSSLGQIGYYRY 661

Query: 659  NYVPVSLPGLPGVISSTLLGNSGIKPERQVETEIGADMSFLNGRLGLEFSYYHKDVKDLL 718
            N+   ++ G     +   +GN  +  E+ ++ + G D+   + R+ +   YY+K   DLL
Sbjct: 662  NFSNTTVAG----FAPNNVGNPNLGWEKTLQVDAGFDLGLFDNRIAITADYYYKKTTDLL 717

Query: 719  LFVNLTPSSGFLNQ--------YRNVGTLTNKGFELMLTGAPVQNENFKWTSTVTFSKNK 770
            L  ++  +SG  +         Y+N+G + NKG EL LT     NE FKW++T  FS N+
Sbjct: 718  LSRSVPGTSGLSDPYNAQASVVYQNIGEVANKGIELSLTTRNFINE-FKWSTTALFSVNR 776

Query: 771  NEVNNIPGGLLLF-PGGFSQVAAVDGYPLGAF--YSTYFARNPDGSLLLTPKGLPQA--E 825
            N+V ++  G+  + P   +   A  GYPLG+F  Y T       G + LTP+    A  +
Sbjct: 777  NKVLSLGDGVNQYIPNNNAPSIAKVGYPLGSFIVYQTDGVIQA-GDVPLTPQANKSAGGQ 835

Query: 826  KEGRDPETGQPTGATSKKVIGDPNPDWTGSFINELTVGKGFSFRTQFDAAYGFEVFNFTR 885
            K       G+ T    + VI +  P +     N  +  KGF       A  G +++N   
Sbjct: 836  KYKDLNGDGKITQGDDRIVIAN-QPGFLAGLTNTFSY-KGFDVNVFLQANVGGKLYN-QN 892

Query: 886  RVGERDFYGGLAGYEPELRGEVPKGTSAALFGIFEN--------YIEDGSYIKLRELSVA 937
            R       G + G    L    P  T+  +   F++        +IE  SY++L+ +S+ 
Sbjct: 893  RANLELATGYVNGSTELLNRWTPGNTNTDVKAAFQDPAITISDRFIESSSYLRLKNVSLG 952

Query: 938  YDFK---PAFLGGNNMRLTLAGRNLFSIDDYSGYDPEVNAAGQTTAVRGFDFVEVPIPRT 994
            Y       A +   N+R+ ++G NL +   Y+G+DPE +  GQ+    G D    P  ++
Sbjct: 953  YTLPKHIAAKIKTQNIRIYVSGANLVTWTKYTGFDPEASVNGQSLLAAGVDNGVYPNSKS 1012

Query: 995  YALGVNVS 1002
               G+++S
Sbjct: 1013 VQFGLSLS 1020



 Score = 26.9 bits (58), Expect = 0.007
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)

Query: 142 ISTVSAASLQNSVATSVDQALA---GKVAGAQISQNSGNPAGGISVRLRGTSTV 192
           ++T  A +L  SV     Q +     K+ G  + + + +P  G+SV+++GT+ V
Sbjct: 3   LATGIALNLGLSVTVKAQQTIPLVQSKLVGTVLDEKTKDPLIGVSVQIKGTTHV 56