Pairwise Alignments

Query, 1003 a.a., SusC/RagA family TonB-linked outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 974 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  300 bits (768), Expect = 3e-85
 Identities = 282/1030 (27%), Positives = 466/1030 (45%), Gaps = 107/1030 (10%)

Query: 20   LMLVLLGQVAFAQSTRYTVTGTVTDARTKVPLPGVVVKFQNSNSATATDANGKYSLTTTQ 79
            LM+  +  +   ++   T++GTVTD++ K+PLPG+ V    + +A  TDANGKY+++   
Sbjct: 6    LMISFIACILAVKAQNRTISGTVTDSK-KLPLPGITVTVLGTKTAVQTDANGKYNISADN 64

Query: 80   GAGTYNLTFSYIGFKPETKPVTLGSAATVVVDAQISEDVVGLDEVVVTGTSVATSKKQLG 139
             +    L F  +GF  +T  V   ++  V +  Q +E    LD V V G + A  K ++ 
Sbjct: 65   ES---TLEFKALGFTTQTIKVGANTSVNVSLVDQTTE----LDAVTVVGYT-AKKKSEIS 116

Query: 140  NAISTVSAASLQNSVATSVDQALAGKVAGAQISQNSGNPAGGISVRLRGTSTVVGSGDPM 199
            +A++TVS + L +  + ++   L GK  G   S  SG+P  G +V +RG  ++     P+
Sbjct: 117  SAVTTVSGSKLNDVTSVNLGNLLQGKAPGVVASSASGDPTAGSNVVVRGVGSINAGTGPL 176

Query: 200  YIVDGVIINNNSPELIDLGGYAQNRLVDINPNDIERIEIIKGAAAAAIYGSRASNGVVQI 259
             +VDG           ++GG         NP D++ I I++ AAA  +YGSRA+NGV+ +
Sbjct: 177  IVVDG-----------NIGG-------TYNPADVDNITILRDAAATGLYGSRAANGVIIV 218

Query: 260  FTKRGKAGKPKIAASTQFRVSEVR----KTLDYN---DYPFRFVDTDPGNLTQEPVQRYD 312
             TK+GKAG+ + + ++   +++      K +D     DY   F  T P           D
Sbjct: 219  TTKKGKAGETRFSLNSTIGIAKATTGNFKLMDAQQLYDYQKSFFTTPPAASVLN--TNTD 276

Query: 313  FQDKIFRTAFGTENNLSVSGGSENTQYYLSGNYLSNQGIIDNTNFNRGGARIRIDQTLNN 372
            + ++ FRTA    + L+ SGGSE TQ+Y+SGNY   +G + N +  +   R  +   L  
Sbjct: 277  WWNEAFRTAMVNNHTLTASGGSEKTQFYISGNYFKEEGTLINNDKTQYSLRANLTSQLTK 336

Query: 373  WMSVSVGANYVLSTSEEIPNGGLSEAYGALTGFIFSNNYINP-EPVNGVFPSTAPTSILR 431
             + ++   + ++      P   + +AY  +      N   +P +P N   PS        
Sbjct: 337  KLKLTALLSGIVINDNYNPESAVYQAYLNMPYDPAYNTDGSPTDPRN--IPSWKGRD--- 391

Query: 432  RTNPLEAIERFKFGQRTNRFIGDLQLMLTPIPNLNINYTLGYDNATQIATG----FIPVG 487
            R+N L++++      R+    GD+ L    I NL I+    Y+ AT IA G    +    
Sbjct: 392  RSNFLQSLQYNYSKARSYTTTGDVNLDYDLIKNLTIS---SYNRAT-IANGRSNSYADRR 447

Query: 488  NTTPSYDTGYSRRADRTTYLLNNDLNASYRATLADWLESTTGVGATVQVDKVYATGITAT 547
            + + + + G     +  +  L +     Y   + +   S  GV A ++  K   +GITA 
Sbjct: 448  SQSGATNLGTVSLGNTFSTTLLSSNRIKYNVNIGNHSLSVLGV-AELESYKYDESGITAK 506

Query: 548  QLGPIAETTSNGATIISSELRSDINIF---GFFAQQTFGIGDRLFLTGAGRYDVSSVFGE 604
             L P      N AT I+++     + +    + AQ  +    + +L G+   + SS FG+
Sbjct: 507  GL-PAGLDAINTATDITNKPTGRYDQYQNIKYLAQADYSFQGKYYLVGSIVNEYSSRFGK 565

Query: 605  DNRWQFYPKVSGSYLISNEKFWEGLSQVIPILKVRASYGQAGN--LTAIGAFD------- 655
            +N    + +   S+++SNE F +  +  +  LK+RAS+G  GN   T   + D       
Sbjct: 566  NNPAATFYQAGASWILSNEDFLKS-NTTLTFLKLRASFGTTGNQRFTTNDSPDGFYQSLG 624

Query: 656  RYTNYVPVSLPGLPGVISSTLLGNSGIKPERQVETEIGADMSFLNGRLGLEFSYYHKDVK 715
             Y      S  G  G    T + N  +  E+     +G D      R+ +    Y K   
Sbjct: 625  LYNLNAGASYNGQTGAF-PTQIANPDLTWEKSRAYNLGLDFGLFK-RIDITIDAYDKRNS 682

Query: 716  DLLLFVNLTPSSGFLNQYRNVGTLTNKGFELMLTGAPVQNENFKWTSTVTFSKNKNEVNN 775
            DLL  V L  + G+ +  RN+G + N+G EL +    +Q ++F W ++   S N+N+V  
Sbjct: 683  DLLFAVPLPATVGYGSIRRNIGAVRNRGIELTINSKNIQQKDFNWETSFNMSFNRNKVME 742

Query: 776  IPGGLLLFPGGFSQVAAVDGYPLGAFYSTYFAR-NP-DGSLLLTPKGLPQAEKEGRDPET 833
            +  GLL+       +A   G+ +  +Y   +A  NP DG  L      P       +  T
Sbjct: 743  LNQGLLVVNTSTQPIAL--GHDMDEWYMQKWAGVNPADGKPLWEKLDDPTGVTSTYNQAT 800

Query: 834  GQPTGATSKKVIGDPNPDWTGSFINELTVGKGFSFRTQFDAAYGFEVFNFTRRVGERDFY 893
             Q TG +S        P ++G   N L   K F+     +  YG  V+N +R   + D  
Sbjct: 801  RQYTGKSSA-------PKFSGGLTNTLEY-KNFTLSAFLNFVYGNWVYNDSRFYFDND-- 850

Query: 894  GGLAGYEPE------LRGEVPKGTSA----ALFG-------IFENYIEDGSYIKLRELSV 936
            G    Y  +      +R   P  T A    A FG           ++EDGSY++LR ++V
Sbjct: 851  GVYESYNQQVLPKGSVRWTTPGQTDATHPQAKFGGNLQSHQSSTRFLEDGSYLRLRNVTV 910

Query: 937  AYDFKPAFL---GGNNMRLTLAGRNLFSIDDYSGYDPEVNAAGQTTAVRGFDFVEVPIPR 993
             Y+    +L     N  RL ++G NLF+   +SG DPEV+  G      G      P  R
Sbjct: 911  GYNLPTNWLKKASINAARLYVSGDNLFTATKFSGVDPEVDLTG------GISSFRYPTSR 964

Query: 994  TYALGVNVSF 1003
             +  GVN++F
Sbjct: 965  RFVFGVNLTF 974