Pairwise Alignments

Query, 1003 a.a., SusC/RagA family TonB-linked outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 1111 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  311 bits (796), Expect = 2e-88
 Identities = 274/1021 (26%), Positives = 461/1021 (45%), Gaps = 99/1021 (9%)

Query: 38   VTGTVTDARTKVPLPGVVVKFQNSNSATATDANGKYSLTTTQGAGTYNLTFSYIGFKPET 97
            V G + D +    LPGV +K +N +  T + ++G++ L          L  SYIG+   T
Sbjct: 133  VKGKILDEKGNT-LPGVTIKVKNGSIGTTSGSDGEFILKNVPEDAI--LVISYIGYA--T 187

Query: 98   KPVTLGSAATVVVDAQISEDVVGLDEVVVTGTSVATSKKQLGNAISTVSAASLQNSVATS 157
            + +     A + +      D   L++VVV G  + T KK L  A+ST+   +++N     
Sbjct: 188  QEIKADQKADMAIKLLPKSD--NLNDVVVVGYGI-TKKKDLTGAVSTIDKKAIENLPINR 244

Query: 158  VDQALAGKVAGAQISQNSGNPAGGISVRLRGTSTVVGSGDPMYIVDGVIINNNSPELIDL 217
            VDQ L GK AG Q++  +G P  G S+R+RG +++ G+ +P+Y++DG+I           
Sbjct: 245  VDQMLQGKAAGVQVTSTNGAPGSGASIRIRGGNSINGTNEPLYVIDGLI----------- 293

Query: 218  GGYAQNRLVDINPNDIERIEIIKGAAAAAIYGSRASNGVVQIFTKRGKAGKPKIAASTQF 277
             G   N    +NP DI  + I+K A++ AIYG+R SNGVV I TK+G AG   I      
Sbjct: 294  -GADINA---VNPQDIASMSILKDASSTAIYGARGSNGVVIITTKKGAAGSDNINFEAYT 349

Query: 278  RVSEVRKTLD-YNDYPFRFVDTDPGNLTQEPV---------QRYDFQDKIFRTAFGTENN 327
             V ++ K +   N   +  +  +   L   P+            ++Q +I RTA  +   
Sbjct: 350  GVQQLPKEIAMLNATQYAELANEAAVLNGTPILYPNPQSLGVGTNWQREITRTAPMSNYT 409

Query: 328  LSVSGGSENTQYYLSGNYLSNQGIIDNTNFNRGGARIRIDQTLNNWMSVS--VGANYVLS 385
            L  SGGS+   Y+LSGNY + +GII N+ F+R   R  + + L + ++V   +     ++
Sbjct: 410  LGASGGSKGFNYFLSGNYNNQEGIILNSGFSRYQFRTNLSKQLRDNVTVGAMINVGRTVT 469

Query: 386  TSEEIPNGGLSEAYGALTGFIFSNNYINPEPVNGVFPSTAPTSILRRTNPLEAIERFKFG 445
             +  +  GG S++  + T +       NP+   G F S  P   L   NP+ A     + 
Sbjct: 470  RNNTVSLGGPSQS--SATAYSPIAAVYNPD---GSFTSQKPNDPLYYDNPV-AQGTVPYN 523

Query: 446  QRTNR-FIGDLQLMLTPIPNLNINYTLGYDNATQIATGFIP--VGNTTPSYDTGYSRRAD 502
            +  N  F G+L L    I  L    T G          ++P  + +   S + G +    
Sbjct: 524  RTINSYFTGNLTLDWELIKGLTFKSTFGSQMTFNKVNRYLPSSLPSRVNSGNAGMANVDA 583

Query: 503  RTTYLLNNDLNASYRATLADWLESTTGVGATVQVD----------KVYATGITATQLGPI 552
              T ++ N+   +Y             +G + Q +          K YA  +    LG  
Sbjct: 584  ANTIMVLNENTLNYNKDFGTDHNFNAVIGTSYQTESLERFNAEGQKYYADPLLYNNLGAG 643

Query: 553  AETTSNGATIISSELRSDINIFGFFAQQTFGIGDRLFLTGAGRYDVSSVFGEDNRWQFYP 612
            ++ T     I S E +    IF + A+  +   ++  LT  GR D SS F  +++  F+P
Sbjct: 644  SQATFK---IGSGETK--YAIFSYLARFNYTYKNKYLLTLTGRSDASSRFAANHKRAFFP 698

Query: 613  KVSGSYLISNEKFWEGLSQVIPILKVRASYGQAGNLTAIGAFDRYTNYVPV--SLPGLPG 670
              + ++  SNE F + L+ V   LK+RASYG  G+   I  +    +  PV   L G   
Sbjct: 699  AAAIAWNASNEDFIKNLN-VFDNLKIRASYGSNGS-QGIDTYQSLASLRPVIGYLIGGTN 756

Query: 671  VI--SSTLLGNSGIKPERQVETEIGADMSFLNGRLGLEFSYYHKDVKDLLLFVNLTPSSG 728
            ++  +S  L N  +  E   + + G + S L  R+ +E  YY+K   +LLL   L   SG
Sbjct: 757  IVGFTSDRLPNPDLTWETTKQFDAGIEFSILKKRVNVELDYYNKVTSNLLLNQQLATQSG 816

Query: 729  FLNQYRNVGTLTNKGFELMLTGAPVQNENFKWTSTVTFSKNKNEVNNIPGGLLLFP---- 784
            + ++  N+G++ N G EL +    +  + F W++T+  + N+N+V ++ GG+  F     
Sbjct: 817  YSSKVTNIGSINNHGLELAINTDNIVRDGFSWSTTLNIAANRNKVLDL-GGVQAFDNAST 875

Query: 785  --GGFSQVA-AVDGYPLGAFYSTYF-----ARNPDGSLLLTPKGLPQAEKEGRDPETGQP 836
              G +S ++  + G P+G F+ T +        P      +P      +   +D      
Sbjct: 876  GYGTYSTISRLIVGQPVGTFWGTTYVGTKKTDTPPTGTATSPGNNRIGDALYQDLNGDGK 935

Query: 837  TGATSKKVIGDPNPDWTGSFINELTVGKGFSFRTQFDAAYGFEVFNFTRRVGER-----D 891
                   VIG+ NP + G   N  T  K FS    F  +YG +V N +           +
Sbjct: 936  IDVADYHVIGNSNPKFYGGLGNTFTY-KKFSLNVFFQGSYGNQVMNISDNFNNSSSPGFN 994

Query: 892  FYGGLAG--YEPELRGEVPKGTSAALFGIFENYIEDGSYIKLRELSVAYDFKPAFLGGNN 949
             Y  +A          ++P+      +      + DGS+++LR  ++ ++     L G++
Sbjct: 995  QYASVADRWTVNNQSSDIPRLPKTLDYIYSSRSVYDGSFLRLRTATIGFN-----LTGSD 1049

Query: 950  MRLT--------LAGRNLFSIDDYSGYDPEVNAAGQTTAVRGFDFVEVPIPRTYALGVNV 1001
            M +         + G NL+    Y  YDPEVN+ G  + +RGFD+ + P  RT+ LG+N+
Sbjct: 1050 MHVKWIQKLNVYVTGTNLWLWTKYPYYDPEVNSYGTNSTLRGFDYTDYPQNRTFILGLNL 1109

Query: 1002 S 1002
            +
Sbjct: 1110 T 1110