Pairwise Alignments

Query, 1003 a.a., SusC/RagA family TonB-linked outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 1037 a.a., SusC/RagA family protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  347 bits (890), Expect = 2e-99
 Identities = 296/1038 (28%), Positives = 483/1038 (46%), Gaps = 72/1038 (6%)

Query: 6    FNGWSNLKVTLMCALMLVLLGQVAFAQST---RYTVTGTVTDARTKVPLPGVVVKFQNSN 62
            F G   +  + +   +L++L +   AQ+T     T+TGTV DART   LPGV V    + 
Sbjct: 30   FIGRKKITFSFLILFLLLVLSKNGHAQTTPLINSTLTGTVRDARTGETLPGVNVGINGTT 89

Query: 63   SATATDANGKYSLTTTQGAGTYNLTFSYIGFKPETKPVTLGSAATVVVDAQISEDVVGLD 122
                TD NG +   T Q    Y LT S++G+K   + V  GS   V ++ Q++     L+
Sbjct: 90   HTALTDNNGIFRFVTGQKF-PYTLTISFVGYKT-LQVVANGSPLEVKLEEQVNT----LN 143

Query: 123  EVVVTGTSVATSKKQLGNAISTVSAASLQNSVATSVDQALAGKVAGAQISQNSGNPAGGI 182
             VVV G      K     ++S+V    L+     S D+ + G ++GAQ++Q+SG P GG+
Sbjct: 144  NVVVVGYGTQ-KKSDFTGSLSSVPT-ELKGVPVASPDRLIQGAISGAQVTQSSGQPGGGV 201

Query: 183  SVRLRGTSTVVGSGDPMYIVDGVIINNNSPELIDLG---GYAQNRLVDINPNDIERIEII 239
            S+R+RG +++    +P+Y++DG  + N     +D G   G A N L  INP DIE I+++
Sbjct: 202  SIRVRGGTSINAGNEPLYVIDGFPVYNGDAS-VDAGITNGPAINPLSAINPADIESIDVL 260

Query: 240  KGAAAAAIYGSRASNGVVQIFTKRGKAGKPKIAASTQFRVSEVRKT---LDYNDYPFRFV 296
            K A+A AIYGSR +NGV+ I TKRG      I  S  +   +V K    L+  ++     
Sbjct: 261  KDASATAIYGSRGANGVILITTKRGSKNSFSINYSGYYGTQKVSKNIGVLNAREWGALKN 320

Query: 297  D--TDPGNL---TQEPVQRY----DFQDKIFRTAFGTENNLSVSGGSENTQYYLSGNYLS 347
            D  TD G     TQ  + +     D+Q + FRTA    ++LS+S G+E T+  LSGNY  
Sbjct: 321  DALTDAGKAPFYTQAQLDQLGEGTDWQSEAFRTAPVQNHSLSISSGNEKTRLLLSGNYFK 380

Query: 348  NQGIIDNTNFNRGGARIRIDQTLNNWMSVSVGANYVLSTSEEIPNGGLSEAYGALTGFIF 407
             +G+I NT F+R  A++ ID  +N    +    N  ++ ++  P+G ++     +     
Sbjct: 381  QEGVILNTGFDRYSAKLNIDHEVNAKFKLGAYLNGSITHADVAPSGIVANILSMVP---- 436

Query: 408  SNNYINPEPVNGVFPSTAPTSI-LRRTNPLEAIERFKFGQRTNRFIGDLQLMLTPIPNLN 466
                +  +  NG F  TA +S      NP+  +       +T RF+ +     T I  L 
Sbjct: 437  ---VVPVKDANGNF--TANSSFGATVANPIATLSLQTNETKTTRFLANSFGEYTIIDGLT 491

Query: 467  INYTLGYDNATQIATGFIPVGNTTPSYDTGYSRRADRTTYLLNNDLNASYRATLADWLES 526
               +LG D        ++P      S   G +     +T    N+   +Y+ T+      
Sbjct: 492  ARVSLGADIINNKQNRYLP-SALYESLPGGNASIGALSTLNWLNENTINYKKTVNGKHSF 550

Query: 527  TTGVGATVQ--VDKVYATGITATQLGPIAETTSNGATIIS--SELRSDINIFGFFAQQTF 582
               +G T Q  V +V+  G +               T+++  + L+++  +  F A+  +
Sbjct: 551  DILLGNTQQKSVTEVFTAGTSNFVSDAFKYNNLASGTVLATPTSLKTEWALQSFLARINY 610

Query: 583  GIGDRLFLTGAGRYDVSSVFGEDNRWQFYPKVSGSYLISNEKFWEGLSQVIPILKVRASY 642
               ++  LT   R D SS FG +N+W  +P  + ++  SNE F +G+ + I  LK R S 
Sbjct: 611  AYDNKYLLTLTARADGSSRFGINNKWGTFPSAAIAWNASNEGFLQGI-KAISSLKFRFSA 669

Query: 643  GQAGN--LTAIGAFDRYTNYVPVSLPGLPGVISSTLLGNSGIKPERQVETEIGADMSFLN 700
            G  GN  +    +  R ++Y       L   ++     N  +  E+  +   G D+   +
Sbjct: 670  GVTGNQEIDPYRSLSRLSSYQYTFANTLVNGLAIASFANPDLTWEKTAQYNFGIDLELFS 729

Query: 701  GRLGLEFSYYHKDVKDLLLFVNLTPSSGFLNQYRNVGTLTNKGFELMLTGAPVQNENFKW 760
            GR+ L    Y+K   DLLL V +  SS   + ++N+G + NKG EL L     Q + F W
Sbjct: 730  GRIQLTTDVYYKRTSDLLLEVPVPYSSSLTSAFQNLGVVRNKGVELGLKTINFQGD-FNW 788

Query: 761  TSTVTFSKNKNEVNNIPGGLLLF------PGGFSQVAAVDGYPLGAFYSTYFARNPDGSL 814
            T+ + FS N+N++  + G    F      P          G  +GAFY        DG  
Sbjct: 789  TTNLIFSANRNKIITLGGAPYFFVTDPASPTTLPTQIIKVGESVGAFY----MYETDGVN 844

Query: 815  LLTPKGLPQAEKEGRDPETGQPTGATSKKVIGDPNPDWTGSFINELTVGKGFSFRTQFDA 874
              T  GL + +    D   G  T    +K++G   P +  S  N     K F     F+A
Sbjct: 845  PAT--GLQKYKDLNGD---GAITQDADRKIVGSSQPKFLASITNTFRC-KNFDLSVFFNA 898

Query: 875  AYGFEVFNFTRRVGE--RDFYGGLA----GYEPELRG-EVPKGTSAALFGIFENYIEDGS 927
            +YG ++FN+TR   E    + G +A     + P  R  +V K        I + ++EDG+
Sbjct: 899  SYGNKIFNWTRANLELGTGYTGAVATLLDRWTPTNRNTDVHKAIENPAVTISDRFVEDGA 958

Query: 928  YIKLRELSVAYDFKPAFLGG---NNMRLTLAGRNLFSIDDYSGYDPEVNAAGQTTAVRGF 984
            +I+L+ +S+ Y      L     + +R+ ++G NL++   Y+GYDPEV+  GQ +   G 
Sbjct: 959  FIRLKNVSIGYSIPGRLLSKLKLSALRVYVSGSNLYTWTKYTGYDPEVSTNGQNSISTGM 1018

Query: 985  DFVEVPIPRTYALGVNVS 1002
            D    P  ++   G++++
Sbjct: 1019 DRAAYPNAKSIQGGISLT 1036