Pairwise Alignments

Query, 1003 a.a., SusC/RagA family TonB-linked outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 1001 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  388 bits (997), Expect = e-112
 Identities = 309/1039 (29%), Positives = 486/1039 (46%), Gaps = 103/1039 (9%)

Query: 16   LMCALMLVLLGQVAFAQSTRYTVTGTVTDARTKVPLPGVVVKFQNSNSATATDANGKYSL 75
            ++ A++ V     A AQ  ++T +G V DA+ K PL GV V+ + + +   TD +G ++L
Sbjct: 15   ILFAILAVFFSLSASAQ--QFTASGQVLDAQ-KEPLIGVSVQEKGTTNGAITDLDGNFTL 71

Query: 76   TTTQGAGTYNLTFSYIGFKPETKPVTLGSAATVVVDAQISEDVVGLDEVVVTGTSVATSK 135
            T    A    L FSY+G+K + +  +     T+  D ++      L+EVVV G   +  +
Sbjct: 72   TVQSNA---TLIFSYVGYKSQEQKASRQMKVTLQEDNEV------LEEVVVIGYG-SVKR 121

Query: 136  KQLGNAISTVSAASLQNSVATSVDQALAGKVAGAQISQNSGNPAGGISVRLRGTSTVVGS 195
            K +  AISTVS   L      S  QA+ GK AG  + Q SG P G +S+R+RGT+++ GS
Sbjct: 122  KDVTTAISTVSTKDLDVRPIVSAGQAIQGKAAGISVIQPSGTPGGEMSIRVRGTTSMNGS 181

Query: 196  GDPMYIVDGVIINNNSPELIDLGGYAQNRLVDINPNDIERIEIIKGAAAAAIYGSRASNG 255
             DP+Y+VDGV ++N               +  ++PNDIE ++I+K A++A+IYGSRA+NG
Sbjct: 182  NDPLYVVDGVPVDN---------------IKFLSPNDIESMQILKDASSASIYGSRAANG 226

Query: 256  VVQIFTKRGKAGKPKIAASTQFRVSEVR-KTLDYNDYPFRFVDTDPG--NLTQEPVQRYD 312
            V+ I TK G  GK K++ + QF +++V  K    N   ++ +  + G  +L      R D
Sbjct: 227  VILITTKAGATGKAKVSLTAQFGLNKVADKVESLNAAQYKELQDEIGLVSLPDGLPDRTD 286

Query: 313  FQDKIFRTAFGTENNLSVSGGSENTQYYLSGNYLSNQGIIDNTNFNRGGARIRIDQTLNN 372
            + D+ ++T       ++VS G+E  +YYLS  YL  +GI+D + + R   R+ ++  + +
Sbjct: 287  WFDETYKTGKMQNYQVAVSNGNEKMKYYLSAGYLDEKGILDISYYKRYNFRVNLENQIRS 346

Query: 373  WMSVSVGANYVLSTSEEIPNGGLSEAYGALTGFIFSNNYINPEPVNGVFPSTAPTSILRR 432
            W++VS   +Y    S+   NGG +   GA  G +     IN      ++ +  P      
Sbjct: 347  WLTVSANISY----SDYTSNGGGAMGTGANRGGVVL-AVINTPTYAPIWDALNPNQYYNN 401

Query: 433  -------TNPLEAIERFKFGQ-RTNRFIGDLQLMLTPIPNLNINYTLGYDNATQIATGFI 484
                   TNPLE + R K  + + NR +    ++LT +P L    TL  D    + T F+
Sbjct: 402  FYGVGNITNPLENMARAKNNKDKENRLLASGNVLLTLLPELKFKSTLTLDRRNAVNTTFL 461

Query: 485  -PVGNTTPSYDTGYSRRADRTTYLLNNDLNASYRATL-ADWLESTTGVGATVQVDKVYAT 542
             P+         G +        +L  D   +Y        LE   G   T   D  Y+ 
Sbjct: 462  DPISTAWGRNQYGEASDNRNMNTVLTFDNVFTYNKNFKRHGLEVMAGSSWT---DSDYSN 518

Query: 543  G-ITATQLGPIAETTSNGATIISSEL----RSDINIFGFFAQQTFGIGDRLFLTGAGRYD 597
              I  +        T N A  I+ +      S   I  FF +  +    +  LT   R D
Sbjct: 519  SWINGSHYRNDLIQTLNAANKIAWDNTGTGASQWGIMSFFGRVAYNFDSKYLLTANLRAD 578

Query: 598  VSSVFGEDNRWQFYPKVSGSYLISNEKFWEGLSQVIPILKVRASYGQAGNLTAIGAF--- 654
             SS    D+RW  +P  S ++ +S+EKF   L+  I   K+R  +GQ GN + IG +   
Sbjct: 579  GSSKLHPDHRWGVFPSFSAAWRVSSEKFMADLTW-IDDFKIRGGWGQTGNQSGIGDYAYL 637

Query: 655  DRYT----NYVPVSLPG-------LPGVISSTLLGNSGIKPERQVETEIGADMSFLNGRL 703
             RY      +  V+  G           IS   L  S +  E   +T IG D++ LNGRL
Sbjct: 638  QRYNIGRIEWFKVAAEGDTTDYANAVPTISQANLRTSDLTWETTTQTNIGLDLTVLNGRL 697

Query: 704  GLEFSYYHKDVKDLLLFVNLTPSSGFLNQY-RNVGTLTNKGFELMLTGAPVQNENFKWTS 762
                 YY+K  K++L+ V+L   +       RN G +TNKGFEL ++    +   F W +
Sbjct: 698  TFNMDYYYKKTKNMLMNVSLPAGAAAATSIARNEGEMTNKGFELTISSKNFRGGAFTWDT 757

Query: 763  TVTFSKNKNEVNNIPGGLLLFPGGFSQVAAVDGYPLGAFYSTYFARNPDGSLLLTPKGLP 822
                S N+N++  +    + +    + V            + Y  RN  G  L    G  
Sbjct: 758  DFNISFNRNKLTKLELQKVYYDAKTADVV-----------NDYVVRNEPGRAL---GGFY 803

Query: 823  QAEKEGRDPETGQ----------PTGATSKKVIGDPNPDWTGSFINELTVGKGFSFRTQF 872
                +G DPETG+              + +  IGDPNPD+T    N  +  KGF+     
Sbjct: 804  GYISDGVDPETGELMYRDLSGDGKISTSDRTYIGDPNPDFTYGLTNTFS-WKGFNLSVFI 862

Query: 873  DAAYGFEVFNFTRRVGERDFYGGLAGYEPELRGEVP---KGTSAALFGIFEN--YIEDGS 927
              +YG ++FN +R   E  + G     +   R ++P        A F +  +  +IEDGS
Sbjct: 863  QGSYGNDIFNASRIETEGMYDGKNQSTKVLNRWKIPGQITNVPKANFKLLNSTYFIEDGS 922

Query: 928  YIKLRELSVAYDFKPAFL---GGNNMRLTLAGRNLFSIDDYSGYDPEVNAAGQTTAVRGF 984
            Y++L+++S++Y+FK   L   G   ++      NL +   YSG DPEVN  G +  V+G 
Sbjct: 923  YLRLKDVSLSYNFKGKLLQKWGITRLQPYFTATNLLTWTSYSGMDPEVNQWGNSGTVQGI 982

Query: 985  DFVEVPIPRTYALGVNVSF 1003
            D+   P  R+Y  G+NV F
Sbjct: 983  DWGTYPHSRSYVFGINVEF 1001