Pairwise Alignments

Query, 199 a.a., RNA polymerase subunit sigma-24 from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 186 a.a., RNA polymerase sigma factor from Cupriavidus basilensis FW507-4G11

 Score = 51.2 bits (121), Expect = 1e-11
 Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 12/185 (6%)

Query: 16  PSDAELLRLYRQTGELEHLGELFQRHSEMVYLVCLKYLREEEESKDATMHLFEHL--ATA 73
           P DA L R+ R   +   + E+  R    V  +  + L +  E++D    +F  L    A
Sbjct: 6   PDDALLARIGRH--DAAAVREMVARKLPRVLALATRMLGDSGEAQDVAQEVFMRLWKHAA 63

Query: 74  LLQHEVSNFKSWLYATAKNHCLMQLRAKKGQPGTGLDETSALFVENQEPLHLSEAEQREE 133
             Q   + F +WL+  A N C  +LR  + Q    + E +A     +E L  +    R  
Sbjct: 64  RWQPGRARFDTWLHRVALNLCYDRLRGAREQAMEPVPEQAAPGAGPEEALDAAAQGAR-- 121

Query: 134 TEQLLQQALQQLPPAQYTCVELFYLQQKSYKEIADLTGHELSKVKSYIQNGKRNLK--IY 191
               +  AL +LP  Q   + L Y Q+    E A L G  +  ++S +   +RNL+  + 
Sbjct: 122 ----VGAALAKLPARQREALVLQYYQELPNGEAAALMGISIEALESLLARARRNLRDLLM 177

Query: 192 MEKHH 196
            + HH
Sbjct: 178 QDGHH 182