Pairwise Alignments

Query, 199 a.a., RNA polymerase subunit sigma-24 from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 215 a.a., sigma-70 family RNA polymerase sigma factor from Ralstonia sp. UNC404CL21Col

 Score = 51.2 bits (121), Expect = 1e-11
 Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 11/187 (5%)

Query: 12  AKPPPSDAELLRLYRQT---GELEHLGELFQRHSEMVYLVCLKYLREEEESKDATMHLFE 68
           A+PP +DAE L    Q    G+ + L  L+ R +  ++ + L+ L  ++ ++D     F 
Sbjct: 25  ARPPSADAEELAALLQRISLGDRDALRTLYTRCAPKLFGLALRILVRKDWAEDVLQESFV 84

Query: 69  HL---ATALLQHEVSNFKSWLYATAKNH---CLMQLRAKKGQPGTGLDETSALFVENQEP 122
           ++   A     H  +   +W+    +N    CL +  A++ Q    LD+  A  + +  P
Sbjct: 85  NIWRHAGDYRPHLAAPM-TWMTTIVRNRALDCLRRQHAERVQESVPLDDAYADVLADHAP 143

Query: 123 LHLSEAEQREETEQLLQQALQQLPPAQYTCVELFYLQQKSYKEIADLTGHELSKVKSYIQ 182
                A   ++  + L + L++L P Q   V L YL+  S+ E+A      L  VKS+++
Sbjct: 144 GPADIALAGQQA-RALAECLKRLDPKQRQVVSLAYLRDLSHSELAQSLSLPLGTVKSWMR 202

Query: 183 NGKRNLK 189
            G   L+
Sbjct: 203 RGLDRLR 209