Pairwise Alignments

Query, 199 a.a., RNA polymerase subunit sigma-24 from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 186 a.a., RNA polymerase sigma24 factor from Burkholderia phytofirmans PsJN

 Score = 48.1 bits (113), Expect = 1e-10
 Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 10/156 (6%)

Query: 37  LFQRHSEMVYLVCLKYLREEEESKDATMHLFEHL--ATALLQHEVSNFKSWLYATAKNHC 94
           L  R    +  +  + L +  E++D    +F  +    +  +   + F +W++  A N C
Sbjct: 25  LVARKLPRLLALATRMLGDRMEAEDVAQEVFVRIWKQASRWREGEAKFDTWIHRVALNLC 84

Query: 95  LMQLRAKKGQPGTGLDETSALFVENQEPLHLSEAE-QREETEQLLQQALQQLPPAQYTCV 153
             +LR ++ +P   L E +       +P  L EA  +    +Q ++ AL  LP  Q   +
Sbjct: 85  YDRLRGRREEPRDELPEEA-------DPAPLPEAGLEARAQDQRVRDALAALPARQREAL 137

Query: 154 ELFYLQQKSYKEIADLTGHELSKVKSYIQNGKRNLK 189
            L Y Q+ S  + A L G  +  ++S +   +RNL+
Sbjct: 138 VLNYYQEMSNIDAAALMGISVDALESLLARARRNLR 173