Pairwise Alignments

Query, 251 a.a., YebC/PmpR family DNA-binding transcriptional regulator from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 247 a.a., conserved hypothetical protein, with a conserved domain of unknown function (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  184 bits (466), Expect = 2e-51
 Identities = 101/226 (44%), Positives = 141/226 (62%), Gaps = 6/226 (2%)

Query: 22  SKIFTKLIKEITVAVKEGGADPDANPRLRLAIQMSKGANMPKDNIERAVSKGEGGDASDY 81
           +K FT+L K+I +AVK GG +P+ NP LR  I   K  NMPKDNIERA+    G D SDY
Sbjct: 20  AKTFTRLGKQIAIAVKAGGPEPENNPTLRSVIATCKRENMPKDNIERAIKNAMGKDQSDY 79

Query: 82  SQVNYEGYGPGGVAVYVECLTDNINRTVQNLRTMFNKSGGSLGTSGSVEYLFDRKGVFVA 141
             + YEGYGP G+AV+V+ LTDN  RTV ++R++FNK GG+LGT GS+ +LFD K +F  
Sbjct: 80  KSMTYEGYGPHGIAVFVDTLTDNTTRTVADVRSVFNKFGGNLGTMGSLAFLFDHKCMFTF 139

Query: 142 HRNPEQPIDEDELLLELADGGAE---EVEFEEGYMTIYSAMEDFGALQKKVEELNLDLES 198
               +  +D +EL+L+L D   E   E + EEG +TIY   + + A+QK +EE   +   
Sbjct: 140 --KIKDGMDMEELILDLIDYDVEDEYEQDDEEGTITIYGDPKSYAAIQKHLEECGFEDVG 197

Query: 199 ADLQRLPQTTVKVEDPEAVRKVLRLIDSLEDDDDVQQVYHNLELSE 244
            D   +P   +K   PE    + ++I+ LE+ DDVQ VY N++  E
Sbjct: 198 GDFTYIP-NDLKEVTPEQRETLDKMIERLEEFDDVQTVYTNMKPEE 242