Pairwise Alignments

Query, 877 a.a., valine--tRNA ligase from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 959 a.a., valyl-tRNA synthetase (RefSeq) from Shewanella loihica PV-4

 Score =  655 bits (1690), Expect = 0.0
 Identities = 382/959 (39%), Positives = 545/959 (56%), Gaps = 97/959 (10%)

Query: 7   YNPKEVEKKWYDSWMQRGFFRSKPNPNKEPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIR 66
           YNP+ +E+  Y +W ++G+F+   + +   Y I+IPPPNVTG LHMGH   +TI D LIR
Sbjct: 5   YNPQSIEQALYQNWEEKGYFKPHGDESNGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLIR 64

Query: 67  RARMQGKEACWVPGTDHASIATEAKVVAMLK-ERGISKSDISREEFLTYAWEWKEKYGGI 125
             RM+GK   W  GTDHA IAT+  V   ++ E G S+ D+ RE F+   W+WK + GG 
Sbjct: 65  YQRMKGKNTLWQVGTDHAGIATQMLVERKVEAEEGKSRHDLGRETFIDRIWDWKNQSGGT 124

Query: 126 ILDQLKKLGASCDWDRTRFTMEDDMSAAVIEVFVDLYRKGQIYRGVRMVNWDPQGKTALS 185
           I  QL++LGAS DWDR RFTM++ MSAAV EVFV LY    IYRG R+VNWDP+  TA+S
Sbjct: 125 ITKQLRRLGASVDWDRERFTMDEGMSAAVQEVFVRLYNDDLIYRGKRLVNWDPKLHTAIS 184

Query: 186 DEEVVPKDTMAKMYHLNYEVVAEGAA---APTYITVATSRPETIMADVAVAVNPNDERYT 242
           D EV  K+    M+H  Y  +A+GA       Y+ VAT+RPET++ D AVAV+P+DERY 
Sbjct: 185 DLEVENKEKQGSMWHFRYP-LADGALTADGKDYLEVATTRPETMLGDSAVAVHPDDERYQ 243

Query: 243 HLHGKSVRIPLLGKEVPVILDEYVSIDFGTGALKVTPAHDLNDYELGQKHKLP-----TI 297
            L GK + +P++ + +P++ D+YV ++FGTG +K+TPAHD NDYE+G++H LP     TI
Sbjct: 244 SLIGKFILLPIVNRRIPIVADDYVDMEFGTGCVKITPAHDFNDYEVGKRHNLPMFNILTI 303

Query: 298 D--------ILNNDGTLNEQ-----AQLYVGQDRFAARRNIVKDLQEAGHLVKIEEYASV 344
           D        ++N+DGT N++      + + G DRF AR  IV + +  G L KI+ +A  
Sbjct: 304 DAAIRSQAEVVNSDGTANDELDGSLPERFAGLDRFKARTAIVDEFESLGLLGKIDPHALK 363

Query: 345 LQTSERTGAVIEPRLSMQWWCKMDKMAGPALESVMNDEIRLHPPKFKNMYRSWMENIRDW 404
           +   +R+G VIEP L+ QW+  +  MA  A+E+V N +I+  P +++NMY SWM +I+DW
Sbjct: 364 VPYGDRSGVVIEPLLTDQWYVAVAPMAKTAIEAVENGDIKFVPQQYENMYFSWMRDIQDW 423

Query: 405 CISRQLWWGQRIPAYYLPDGSFVVAATEEEALVLARKESGNEALQLSDLRQDEDVLDTWF 464
           CISRQLWWG RIPA+Y   G   V    +EA V A+    +  +    LRQD DVLDTWF
Sbjct: 424 CISRQLWWGHRIPAWYDEAGKVYVG--RDEAEVRAKHNLDDSVV----LRQDPDVLDTWF 477

Query: 465 SSWLWPISVFDGFKDPDNKDILYYYPTNDLVTAPEILFFWVARMIMAGYEF------RNE 518
           SS LW  S   G+ D D + +  ++PT+ LVT  +I+FFWVARMIM    F      + +
Sbjct: 478 SSALWTFSTL-GWPD-DTEALKTFHPTDVLVTGFDIIFFWVARMIMMTMHFIKDEDGKPQ 535

Query: 519 LPFKNVYLTGIVRDAQGRKMSKSLGNSPDPLDLID------------------------- 553
           +PFK VY+TG++RD QG KMSKS GN  DPLD+ID                         
Sbjct: 536 VPFKTVYVTGLIRDEQGNKMSKSKGNVLDPLDMIDGIDLEALVEKRTGNMMQPQLAAKIE 595

Query: 554 ------------QYGADGVRAGMLFSSPAGNDLLFDEKLVEQGRNFSNKIWNAFR--LIK 599
                        +G D +R  +   +  G D+ +D K ++  R+F NKIWNA R  L+ 
Sbjct: 596 KSTRKEFADGIEAHGTDALRFTLAAMASTGRDINWDMKRLDGYRSFCNKIWNASRYVLMN 655

Query: 600 GWEVDESLPFPN---------ETAVKWFESRFNEAFVQIEDHFSKFRISDALLTVYKLVW 650
             E D     PN           A +W    FN+     ++H   +R   A  T+Y+  W
Sbjct: 656 TEEQDCGPQSPNGKADGEMQLSLADRWIVGLFNQTVKAFDEHMENYRFDLAANTLYEFTW 715

Query: 651 DDFCSNYLEMIKPAYQQPIDKQ---TIEATTAFLEKVLKVLHPFMPFITEEIWHDLRERK 707
           + FC  YLE+ KP  Q   + +   T       LE + ++LHP MP++TE IW  ++   
Sbjct: 716 NQFCDWYLELTKPVLQNGTEAEQRGTRHTLVTVLEAMQRLLHPMMPYLTETIWQRVKPLA 775

Query: 708 --DKEYLIVSAWP--KKDKFDKQIIEQMESVLNVIGAIRNIRNSKNIPNSKQLDLFIKAI 763
             + + L+++ +P  +  K D+  +  +E V  VI A+RNIR   NI  SK L+  ++++
Sbjct: 776 GVEGDTLMLAEFPVYQASKVDEAAMADLEWVKQVIVAVRNIRAELNIAPSKPLNAMLRSV 835

Query: 764 SHD---QYEPFLGIIRKLANLNEVQYVEENLEGAISF--IVAGDEFFIPMEGNIDVAAER 818
           S     + E        LA L  +  + +     +S   +V   E  IPM G IDVAAE 
Sbjct: 836 SAQDKARVEANQTFFATLAKLESMTILADGDTAPMSTTQLVGEMELLIPMAGLIDVAAEM 895

Query: 819 ERLTKELEYTKGFLLAVDKKLSNERFVSGAPEAVIANERKKKADAEAKINAIEQSLAAL 877
            R+ K+ E   G    ++ KL+N+ FV+ APEAVI  ER K A+ +  ++ + +  A L
Sbjct: 896 ARIDKQFEKLVGEAKRIEGKLNNQGFVAKAPEAVIEKERAKLAEFQRDMDKLCEQKAEL 954