Pairwise Alignments

Query, 202 a.a., RNA polymerase subunit sigma-24 from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 257 a.a., Alternative RNA polymerase sigma factor SigE from Mycobacterium tuberculosis H37Rv

 Score = 80.9 bits (198), Expect = 2e-20
 Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 15/168 (8%)

Query: 29  AYAELMSIYKKPVYHVVLKMVRNADDAEDLTIEAFAKAFKNLHKFNPEYAFSTWLFRIAT 88
           ++ EL+  +   VY +  ++  N  DAEDLT E F + F+++  + P   F  WL RI T
Sbjct: 83  SWDELVRQHADRVYRLAYRLSGNQHDAEDLTQETFIRVFRSVQNYQPG-TFEGWLHRITT 141

Query: 89  NNCIDFIRKN-RIKTMSIDSAIKIDNGDEITID--FKDKNLNPQEEAIKNQKIEIMQYVV 145
           N  +D +R+  RI+  ++         DE   +  + D  L P            +Q  +
Sbjct: 142 NLFLDMVRRRARIRMEALPEDYDRVPADEPNPEQIYHDARLGPD-----------LQAAL 190

Query: 146 AKLPEKYQRLVTLRYFNELSYEEIATELNAPLGTVKAQLHRARELLYD 193
           A LP +++  V L     LSYEEI   L   LGTV++++HR R+ L D
Sbjct: 191 ASLPPEFRAAVVLCDIEGLSYEEIGATLGVKLGTVRSRIHRGRQALRD 238