Pairwise Alignments

Query, 1064 a.a., SusC/RagA family TonB-linked outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 1025 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  469 bits (1206), Expect = e-136
 Identities = 320/1068 (29%), Positives = 521/1068 (48%), Gaps = 121/1068 (11%)

Query: 5    LLLSFAMVLTLLQQVYA--QSRTVSGTVTDQGTSQGLPGVAVIVKGT-TVGTTTGVDGTY 61
            L L F+++  LL   YA  Q   +SG V     ++ L G  V VKG  T G  T ++G +
Sbjct: 7    LTLCFSLLFCLLSISYASAQQLNISGVVISSEDNEPLIGATVSVKGNPTKGVITDINGQF 66

Query: 62   SINVPANGNTLIFRFIGYKTVEREIG-SAATINVNLGVDDKQLEEVVVVAYGTADKGSFT 120
             ++V      L+  ++G KT E  +      + + L  +   ++EVVV  YG   K SFT
Sbjct: 67   QLSVETGTKLLVVSYVGMKTQEIRVPRKEKELKIVLIPETMDIDEVVVTGYGNFSKSSFT 126

Query: 121  GSATQISAEKIAQRPVTNITNAIAGQAAGVQTNSGSGQPGAGPEIRIRGIGSINSSNDPL 180
            GSA  +  + + + PV ++   + G   GVQ  S SGQPGA   IRIRG+GS N+S +PL
Sbjct: 127  GSANTLRTDMLKEVPVMSVEQKLQGMTTGVQITSSSGQPGANQSIRIRGMGSFNASQEPL 186

Query: 181  YVVDGTPYPGS-------------------IANLNVDDIESISILKDASSTALYGARATN 221
            +V+DG P                       ++ LN  DIE+++++KDA++ +LYG+RA N
Sbjct: 187  FVIDGVPVTSGSMSSGGPDAAYMNNSKTNIMSTLNPSDIENVTVIKDAAAASLYGSRAAN 246

Query: 222  GVVMITTKKGKKGSNQLNVKISQGVSERAIKEYDRVNAYEYYPLIWEAQRNSLVNAAKDP 281
            GV++ITTKKG  G  ++++ +S G S  A+     +N  +   L++E     L+N A D 
Sbjct: 247  GVILITTKKGNTGKVRVDLNVSGGFSHAAVDFRPTLNGDQREELLYE----GLLNYATD- 301

Query: 282  YSLEDANQIASGLKKLRDGKDGSVKGILGYNPFNVANDAIVDANGNINPEAKLLYDDVDW 341
              +E   + AS                      N+   A   A G             DW
Sbjct: 302  NGMESPTEYASS---------------------NIGTYAYKPAMGY-----------TDW 329

Query: 342  FEPLQRSGSRSDYALNYSGGSEKSDYFVSLGYLKEKGYVIRSDYERFTGRVNVNTQATDW 401
             + L R+     Y  + SGG+++S ++ SLGY  ++G    S  +R++ R+NV  +   +
Sbjct: 330  RKELLRTAMHQSYEASVSGGNDRSTFYASLGYNNQEGLAKNSSLDRYSARLNVTQKVGKY 389

Query: 402  LRTGLNVSGTITESNQASTSSSSSYVNPFNFARGIGPIYPVYAHDPSTGAYLLDEDGNRI 461
               G N+    ++ NQ       S +NPF             A   +    + DE+GN +
Sbjct: 390  GEVGANM--MFSQMNQEMNEERGSSINPF----------LCVAMTMTPSMVVRDEEGNYV 437

Query: 462  YDYGNLSNLGLPNRGSNASVGRHIVAETMWNDNLYNR---NVLSARTFGEVKFLQDFKFT 518
              Y           G++ +  R I+ +       YNR     + +  +  ++ ++  K  
Sbjct: 438  GAYD----------GTSLNPLRDILTD-------YNRVRMTRMFSTGYAAIEPIKGLKLK 480

Query: 519  TNLSVDIANYLAAEYDNNKVGDGAPAGRASRTSTTATTYN---INQLLNYSKTFNDRHFV 575
              LS D      + Y N     G  +G  ++T+     Y     +  LNY +TF  +H +
Sbjct: 481  ETLSYDYTIQKDSRYYNPLSSAGPKSGSDAQTAKGFIEYGKLISSTSLNYVRTFARKHHL 540

Query: 576  EALVGHENYSYDYKYMYGMRQGVIVEDNTELGNFTTTNSLDSRTDKYRVESYLSRLNYTF 635
            + L  +E  SY   +  G +  +  +  TE  N    NS  S T  YR+ SYLSRLNY +
Sbjct: 541  DVLAAYEIESYQTDHASGEKSKLPSDKLTEPDNAAVLNSFKSATQAYRMISYLSRLNYDY 600

Query: 636  DDKYTLSGSYRRDGSSRFAKDVRWGDFWSVGASWRLDRETFI-SMPEWVNMLKLRGSYGE 694
            DD+Y ++GSYRRDGSSR + + RWG+FWSV   W L  E F+ ++   ++ +K+R SYG 
Sbjct: 601  DDRYYIAGSYRRDGSSRLSPNNRWGNFWSVSGMWHLGNENFMKAVKPVLSDVKIRASYGV 660

Query: 695  VGNDALLNSDGTDRYYGYQELYTLGMNNAKEPGFLQQDVLGSANLLWESNNSFDIGVEFD 754
             GN           YYGY+ LY+ G N  +  G   +    +  L WE N S ++G++  
Sbjct: 661  NGNQ-------PGSYYGYKGLYSYGENYMEAAG-SYESAQPNDLLTWEKNYSLNLGIDLS 712

Query: 755  LFNRVSGSVEYFNRESENLLFRVPLPLSSGVKEKWENIGTMANTGVEVQLSTDAVKTQDF 814
              NR+  S+EY+NR++++LL+ +P+  ++G      NIG + N GVE +L T  V + DF
Sbjct: 713  FINRIFASLEYYNRDTKDLLYSLPISATTGFTSYLSNIGRLNNKGVEFELRTLNVVSNDF 772

Query: 815  TWNVNLNVSTFKNELKKLP--QEEVITGT-KKYMVGKSIYDYWLRDWYGVDPADGAGLFA 871
             W    N+S  +N++  L    ++ I GT   + VG   + ++++++ GVDP  G+  + 
Sbjct: 773  NWTSVFNLSHNRNKIVSLNGLLDQTIEGTWFIHKVGLPYHTFYVKEFAGVDPLTGSAQYY 832

Query: 872  TDTWVEGKTRVINGDTVTTDSNGAKYHYAGSAIPDFAGGITNTFTYKNLSLSVLLTYQVG 931
             +T  E  +       +TTD+  A+     +A P  +GG TN   YK + L+  LTY +G
Sbjct: 833  LNTKNEDGS---YNRELTTDAAKAESIPYKTATPKVSGGFTNILNYKWIDLTFTLTYSLG 889

Query: 932  GKVYDANYASLMNAGTQGGA----LHKDILNRWQQAGDETDVPRM---DLTTATHYNAQS 984
            G  +D     + N  +   +    L   ++NRWQ+ GD+TD+PR    +  T+T+    S
Sbjct: 890  GYSFDKLGTYIENGSSSIYSSRYNLPAYMMNRWQKPGDQTDIPRFVYGEPATSTN----S 945

Query: 985  DRWLIDASYLNIRSVNLNYVLPSELTSKVFLKNASVFASGENLALFSK 1032
             R++    +L +++  L + LP++ T K+ +    V+ SG NL  ++K
Sbjct: 946  SRYIHSTDHLRLKNFTLGFTLPNQWTQKLMIDKVRVYFSGNNLLTWAK 993