Pairwise Alignments

Query, 1064 a.a., SusC/RagA family TonB-linked outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 1026 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  520 bits (1338), Expect = e-151
 Identities = 348/1086 (32%), Positives = 571/1086 (52%), Gaps = 87/1086 (8%)

Query: 6    LLSFAMVLTLLQQVYAQSRTVSGTVTDQGTSQGLPGVAVIVKGTTVGTTTGVDGTYSI-N 64
            +L  A +   +  V AQ++ V+G V  +   Q + G +V+VKGTT GT T +DG +++ N
Sbjct: 1    MLLLACLFVGISLVTAQTQKVTGVVISEEDGQPVVGASVLVKGTTQGTITDIDGNFNLAN 60

Query: 65   VPANGNTLIFRFIGYKTVEREIGSAATINVNLGVDDKQLEEVVVVAYGTADKGSFTGSAT 124
            VP++  TL   +IG +T  +E+     + V L  D + L+EV+VVAYGTA K SFTGSA 
Sbjct: 61   VPSSAKTLQISYIGMQT--QEVAIKPMVKVTLKSDAQNLDEVIVVAYGTAKKSSFTGSAA 118

Query: 125  QISAEKIAQRPVTNITNAIAGQAAGVQTNSGSGQPGAGPEIRIRGIGSINSSNDPLYVVD 184
             I A+KI      +   A++G+ AGV+T S +G PG+  EI IRG+GSI++S  PLYV+D
Sbjct: 119  VIKADKIVSGSKESFDKALSGKMAGVRTASATGDPGSMAEINIRGVGSISASKSPLYVID 178

Query: 185  GT--------PYPGS----IANLNVDDIESISILKDASSTALYGARATNGVVMITTKKGK 232
            G          Y G     ++ LN +DIES+++LKDA++ +LYG+RA NGV++ITTKKGK
Sbjct: 179  GVVTKADDDMNYYGKTQSVLSTLNPEDIESMTVLKDAAAASLYGSRAANGVIIITTKKGK 238

Query: 233  KGSNQLNVKISQGVSERAIKEYDRVNAYEYYPLIWEAQRNSLVNAAKDPYSLEDANQIAS 292
            +G   ++     G ++ A+  ++ + + +      E+  N LV      Y + D+ Q A 
Sbjct: 239  EGKTNVSYSGEVGWNKMAVNAFNMMGSADLIDYTRESLANCLVT-----YGITDSKQAA- 292

Query: 293  GLKKLRDGKDGSVKGILGYNPFNVANDAIVDANGNINPEAKLLYDDVDWFEPLQRSGSRS 352
             L  + +G D  +   L  +P  VA D I D +G +N          +W + + R+    
Sbjct: 293  -LNNIDNGGDMFIP--LLDSPATVA-DFIHDPSGKVN---------TNWKKEIYRTAFTQ 339

Query: 353  DYALNYSGGSEKSDYFVSLGYLKEKGYVIRSDYERFTGRVNVNTQATDWLRTGLNVSGTI 412
            D+ ++ +GGS K+ ++  +GY K +G V+ SD+ER +GR+NVN +  +WL   L      
Sbjct: 340  DHQISINGGSSKTQFYAGVGYNKSEGIVLGSDFERISGRLNVNHKVNNWLNVAL------ 393

Query: 413  TESNQASTSSSSSYVNPFNFARGIG---PIYPVYAHDPSTGAYLLDEDG--NRIYDYGNL 467
                  + +S   + +  + A+G+G   PI  ++A DP+  A + +EDG  N+   +G +
Sbjct: 394  --KQMIAATSQDGFRDQGDQAQGMGTSSPIGILFAMDPT--APVKNEDGSYNKNAAWGKV 449

Query: 468  SNLGLPNRGSNASVGRHIVAETMWNDNLYNRNVLSARTFGEVKFLQDFKFTTNLSVDIAN 527
            +N  L   G ++      +   M+  ++ N +V        +KF       +    D  +
Sbjct: 450  TNPHLMLGGKDSDTALEWIQTKMFR-SMTNADV-------TIKFCDKLSLNSIFGYDYVD 501

Query: 528  YLAAEY-DNNKVGDGAPAGRASRTSTTATTYNINQLLNYSKTFNDRHFVEALVGHENYSY 586
                EY D N V  G+ +G  SR +  +     +  LNY+ TF D H +  + G E  + 
Sbjct: 502  NKHFEYWDRNSVNGGSVSGMGSRYTFESRVATSSSTLNYTDTFKDMHNLNLMAGFEVENR 561

Query: 587  DYKYMYGMRQGVIVEDNTELGNFTTTNSLDSRTDKYRVESYLSRLNYTFDDKYTLSGSYR 646
            D   +  + +        EL N     +  S T    + SY +  NY +D+KY LS S+R
Sbjct: 562  DLLQIVTVAKR-YSSHYPELANGQPDQAASS-TLGAGMMSYFASGNYNYDNKYYLSASFR 619

Query: 647  RDGSSRFAKDVRWGDFWSVGASWRLDRETFISMPEWVNMLKLRGSYGEVGNDALLNSDGT 706
            RDGSSR ++D RW  FWSV  +WR+ +E F+         K++ SYG  GN   L SD  
Sbjct: 620  RDGSSRLSEDNRWASFWSVSGAWRMSKEGFMQDMPLFTDFKIKASYGTNGN---LPSD-- 674

Query: 707  DRYYGYQELYTLGMNNAKEPGFLQQDVLGSANLLWESNNSFDIGVEFDLFNRVSGSVEYF 766
              YYGY +LYT G      P  +    + +  L WE + +F++G+E+++++RV+ S+EY+
Sbjct: 675  --YYGYMDLYT-GSGYGSAPA-IYWSRMANDKLSWEKSKNFNMGIEWNMYDRVNLSLEYY 730

Query: 767  NRESENLLFRVPLPLSSGVKEKWENIGTMANTGVEVQLSTDAVKTQDFTWNVNLNVSTFK 826
            N+++ +LLF VP  L +G   +WEN+G + N G E++L++  +  ++FTW  N N++  +
Sbjct: 731  NKKTTDLLFEVPTSLITGFDSRWENLGALKNDGFELELNSKNISNKNFTWTSNFNLTYQR 790

Query: 827  NELKKLPQ-EEVITGTKK---YMVGKSIYDYWLRDWYGVDPADGAGLFATDTWVEGKTRV 882
              + KLP+ +++  G  +   +  G+S+Y ++L +W GV+P  G G F    W++ +   
Sbjct: 791  ALVDKLPEGKDIQYGDGEMYLHREGESMYTFYLPEWKGVNPETGLGEF----WLDPED-- 844

Query: 883  INGDTVTTDSNGAKYHYAGSAIPDFAGGITNTFTYKNLSLSVLLTYQVGGKVYDANYASL 942
             +   V  D + A     G A+PD  GG +NTFTYK+  LS L+TYQ GG ++D      
Sbjct: 845  -HSKGVVNDYSEAGKGIVGKALPDVIGGFSNTFTYKDFDLSFLITYQFGGDMFDYPGYFS 903

Query: 943  MNAGTQGGA--LHKDIL-NRWQQAGDETDVPRMDLTTATHYNAQSDRWLIDASYLNIRSV 999
             + G + G+  L +D+  N W+  GD+ D P         ++  S R +     + +R +
Sbjct: 904  HHDGVRIGSMNLSEDVAGNYWKNPGDKVDNPMPIYANPYRWDRFSSRTIKSTDNIRLREM 963

Query: 1000 NLNYVLPSELTSKVFLKNASVFASGENLA-LFSKRDGMNVNQSYSGVTSNSYIPARVYTV 1058
             + Y LP     K  + N  ++    NLA L+SK   ++ + + +G         R    
Sbjct: 964  TVGYTLP---VLKKHISNFRIYFRANNLAMLWSKTKNIDPDVAINGYRQADTPALRSCVF 1020

Query: 1059 GLNVTL 1064
            G+N+ L
Sbjct: 1021 GINIKL 1026