Pairwise Alignments

Query, 1064 a.a., SusC/RagA family TonB-linked outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 1042 a.a., TonB-dependent receptor for vancomycin (SusC-like) (from data) from Bacteroides thetaiotaomicron VPI-5482

 Score =  679 bits (1751), Expect = 0.0
 Identities = 398/1072 (37%), Positives = 624/1072 (58%), Gaps = 50/1072 (4%)

Query: 5    LLLSFAMVLTLLQQVYA---QSRTVSGTVTDQGTSQGLPGVAVIVKGTTVGTTTGVDGTY 61
            LL++F ++L+    VYA   Q + V+GTVT +G  + LPGV+V VKG + GT T +DG Y
Sbjct: 7    LLVAF-LLLSAGNVVYAEAQQEKRVTGTVTSEG--EPLPGVSVQVKGASSGTITDIDGNY 63

Query: 62   SINVPANGNTLIFRFIGYKTVEREIGSAATINVNLGVDDKQLEEVVVVAYGTADKGSFTG 121
            SI  PANG T++FRF+G +TVE+ + +   INV +  + K+LEEV+VVAY TA K SFTG
Sbjct: 64   SIEAPANG-TIVFRFVGLRTVEQAVNNRNVINVTMESESKELEEVMVVAYATAKKYSFTG 122

Query: 122  SATQISAEKIAQRPVTNITNAIAGQAAGVQTNSGSGQPGAGPEIRIRGIGSINSSNDPLY 181
            +A+ + A +I +   ++++  + G  +GVQ ++ SGQPG   EIRIRGIGSIN+S+ PLY
Sbjct: 123  AASTMKAGEIEKLQTSSVSRVLEGTVSGVQASASSGQPGTDAEIRIRGIGSINASSAPLY 182

Query: 182  VVDGTPYPGSIANLNVDDIESISILKDASSTALYGARATNGVVMITTKKGKKGSN-QLNV 240
            VVDG P+ GS+ ++N DDI S+++LKDA+S ALYG+R  NGV++ITTK+G++ S   + V
Sbjct: 183  VVDGVPFDGSVNSINPDDIASMTVLKDAASAALYGSRGANGVIIITTKQGQQDSKATVKV 242

Query: 241  KISQGVSERAIKEYDRVNAYEYYPLIWEAQRNSLVNAAKDPYSLEDANQIASGL-KKLRD 299
            K + G S RA+++YDRVN  +Y+ L WEA RN    ++ D      A Q +  L  KL  
Sbjct: 243  KATLGGSSRAVRDYDRVNTNQYFELYWEALRNQYAKSS-DYTPATAATQASKDLVTKLMG 301

Query: 300  GKDGSVKGILGYNPFNVANDAIVDANGNINPEAKLLYDDVDWFEPLQRSGSRSDYALNYS 359
            G         G NP+       V  +G +   A+ L++  DW + +++   R++  L+ S
Sbjct: 302  G---------GPNPYGTQYPQPVGTDGKLAAGARPLWNS-DWSDAMEQQALRTELNLSVS 351

Query: 360  GGSEKSDYFVSLGYLKEKGYVIRSDYERFTGRVNVNTQATDWLRTGLNVSGTITESNQAS 419
            GG + + YF S GYL +KG  + S Y+RF  R NV ++ T WL+  +N+S   +  N   
Sbjct: 352  GGGKANQYFFSAGYLNDKGIALESGYQRFNLRSNVTSEMTSWLKGSINLSFAHSMQNY-P 410

Query: 420  TSSSSSYVNPFNFARGIGPIYPVYAHDPSTGAYLLDEDGNRIYDYGNLSNLGLPNRGSNA 479
             SS S   N     R +   YP+   + + G+Y LD++G+RIYD+G+        R S +
Sbjct: 411  VSSDSKTSNVITAGRTMPGFYPICEMN-TDGSYKLDDNGDRIYDFGSY-------RPSGS 462

Query: 480  SVGRHIVAETMWNDNLYNRNVLSARTFGEVKFLQDFKFTTNLSVDIANYLAAEYDNNKVG 539
                ++ A    + +   ++  S RT+ E   ++  KF T+ + D+ NY   +Y N K+G
Sbjct: 463  MANWNLPATLPLDKSERMKDEFSGRTYLEATIIEGLKFKTSFNFDLINYNTLDYTNPKIG 522

Query: 540  DGAP-AGRASRTSTTATTYNINQLLNYSKTFNDRHFVEALVGHENYSYDYKYMYGMRQGV 598
                  G +SR ++   ++  N + +Y KT  D HF   L G E YSY Y  +   R  +
Sbjct: 523  PALENGGGSSRLNSRTFSWTWNNIASYDKTIGDHHF-NVLAGMEAYSYRYDELTASRTKM 581

Query: 599  IVEDNTEL--GNFTTTNSLDSRTDKYRVESYLSRLNYTFDDKYTLSGSYRRDGSSRFAKD 656
               D  EL  G+  T  S   R D Y +  YL++  Y + +KY  S S+RRDGSSRFA +
Sbjct: 582  AQPDMPELVVGSQLTGGS-GYRID-YALVGYLTQALYDYQNKYFFSASFRRDGSSRFAPE 639

Query: 657  VRWGDFWSVGASWRLDRETFI-SMPEWVNMLKLRGSYGEVGNDALLNSDGTDRYYGYQEL 715
             RWG+FWS+G SWR+DRE+F+ S   W++ L L+ SYG  GND L    GT  YY  + L
Sbjct: 640  TRWGNFWSLGTSWRIDRESFMASTANWLSALTLKMSYGAQGNDNL----GT--YYASKGL 693

Query: 716  YTLGMNNAKEPGFLQQDVLGSANLLWESNNSFDIGVEFDLF-NRVSGSVEYFNRESENLL 774
            YT+  N  +    L  D + + NL WE+N +F++GV+F LF NR SGS ++F R S++LL
Sbjct: 694  YTIVSNLGENA--LVSDRMATPNLKWETNLNFNVGVDFSLFNNRFSGSFDFFTRRSKDLL 751

Query: 775  FRVPLPLSSGVKEKWENIGTMANTGVEVQLSTDAVKTQDFTWNVNLNVSTFKNELKKLPQ 834
            +  P+  S G     EN+G + NTG+E+ L+   +    + W + +N++ +KN++ +LP 
Sbjct: 752  YSRPIAPSLGYGSIDENVGALKNTGIEMVLNGTIINQNGWVWKLGMNLTHYKNKVTELPL 811

Query: 835  EEV-ITGTKKYMVGKSIYDYWLRDWYGVDPADGAGLFATDTWVEGKTRVINGDTVTTDSN 893
            +++  +G  K  VG+S+YD+++++W GVDP +G  L+  D   +    +      T+D  
Sbjct: 812  KDMPQSGVNKLQVGRSVYDFYMKEWAGVDPDNGNPLWYMDE-KDANDNLTGKRVTTSDYA 870

Query: 894  GAKYHYAG-SAIPDFAGGITNTFTYKNLSLSVLLTYQVGGKVYDANYASLMNAGT-QGGA 951
             A Y+Y   S++P   GG   + ++K   LS +  Y +GG +Y+ +   +++ G+ +G  
Sbjct: 871  SANYYYVNKSSLPKVYGGFNTSLSWKGFDLSAIFAYSIGGYIYNRDITMILHNGSLEGRD 930

Query: 952  LHKDILNRWQQAGDETDVPRMDLTTATHYNAQSDRWLIDASYLNIRSVNLNYVLPSELTS 1011
               +IL RW      TDVP +  TT+ ++N+ S R+L + SY+ ++++ L+Y LP +  S
Sbjct: 931  WSTEILKRWTPENRYTDVPALS-TTSNNWNSASTRFLQNNSYMRLKNLTLSYDLPKQWIS 989

Query: 1012 KVFLKNASVFASGENLALFSKRDGMNVNQSYSGVTSNSYIPARVYTVGLNVT 1063
            K+ L +  VF  G+NL    +  G++  Q  +G+T   Y   R  + G+N++
Sbjct: 990  KLALSSVQVFVQGDNLFTIHRNQGLDPEQGITGITYYRYPAMRTISGGINLS 1041