Pairwise Alignments

Query, 1064 a.a., SusC/RagA family TonB-linked outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 980 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  314 bits (804), Expect = 2e-89
 Identities = 278/1087 (25%), Positives = 471/1087 (43%), Gaps = 135/1087 (12%)

Query: 2    RRVLLLSFAMVLTLLQQVYAQSR-TVSGTVTDQGTSQGLPGVAVIVKGTTVGTTTGVDGT 60
            + +LL     +L +   ++AQS   V G V     ++ + GV+++ KGTT G  T +DG 
Sbjct: 3    KSILLFVLFALLNIPLMLFAQSGYKVKGHVVSAEDNEPMVGVSILEKGTTNGVITDIDGN 62

Query: 61   YSINVPANGN-TLIFRFIGYKTVEREIGS-AATINVNLGVDDKQLEEVVVVAYGTADKGS 118
            Y++ +    + TL+F +IG ++    + +   T+NV L  D   ++EVVVVAYGT  KG+
Sbjct: 63   YTLEIKGTASATLLFSYIGMQSQAHAVSAKTGTLNVRLVSDAALIDEVVVVAYGTRKKGT 122

Query: 119  FTGSATQISAEKIAQRPVTNITNAIAGQAAGVQTNSGSGQPGAGPEIRIRGIGSINSSND 178
                                    IAG  + V+       P AG +  ++G         
Sbjct: 123  ------------------------IAGAVSTVKAEKLENVPAAGFDQSLQG------QTP 152

Query: 179  PLYVVDGTPYPGSIANLNVDDIESIS------ILKDAS--STALYGARATNGVVMITTKK 230
             L V+  +  P   A   +    SI+       + D +  S+A +   +   +  I+  K
Sbjct: 153  GLTVISNSGEPSKAAVFQLRGTNSINSGTSPLFILDGTPISSADFNTISPGDIESISVLK 212

Query: 231  GKKGSNQLNVKISQGVSERAIKEYDRVNAYEYYPLIWEAQRNSLVNAAKDPYSLEDANQI 290
                ++    + + GV     K   R  A +   +   AQ      A+ D + + +  + 
Sbjct: 213  DASSTSIYGARAANGVVVITSK---RGLAIDKAKVTLRAQWGISQLASNDKWVVMNTPER 269

Query: 291  ASGLKKLRDGKDGSVKGILGYNPFNVANDAIVDANGNINPEAKLLYDDVDWFEPLQRSGS 350
                K++                 +   D  + +  N+N   ++  D      PLQ    
Sbjct: 270  IQFEKEIG---------------LDTGQDYDLLSRTNVNWLDEVFNDRA----PLQ---- 306

Query: 351  RSDYALNYSGGSEKSDYFVSLGYLKEKGYVIRSDYERFTGRVNVNTQATDWLRTGLNVSG 410
               Y L+ +  +++ +Y+VS G+  ++G    S + R+  R N   +A++WL+ G N   
Sbjct: 307  --SYELSVNRATDRLNYYVSGGFYDQEGIAQSSSFRRYNMRANAEVKASNWLKVGTNTMM 364

Query: 411  TITESNQASTSSSSSYVNPFNFARGIGPIYPVYAHDPSTGAYLLDEDGNRIYDYGNLSNL 470
               E +QA     + Y  P + +R + P +  Y  D S                     L
Sbjct: 365  AYEEISQAEEGEPALYT-PISGSRFMLPYWNPYNADGS---------------------L 402

Query: 471  GLPNRGSNASVGRHIVAETMWNDNLYNRNVLSARTFGEVKFLQDFKFTTNLSVDIANYLA 530
               N G+    G++ +     N   Y +  L +  F E+  +Q+         D ++  A
Sbjct: 403  ASENDGTWTGTGQNPIEWMANNPVSYKKYKLLSTVFAEITPIQNLTIRGQFGADYSHSTA 462

Query: 531  AEYDNNKVGDGAPAGRASRTSTTATTYNINQLLNYSKTFNDRHFVEALVGHENYSYDYKY 590
                         +G+A R+S+   + +     NY    ND H    L+G E   Y    
Sbjct: 463  FMQSFPSYIINNNSGKAGRSSSDILSLSETLTANYRWALNDDHSFNFLLGQEGIDYQSSG 522

Query: 591  MYGMRQGVIVEDNTELGNFTTTNSLDSRTDKYRVESYLS---RLNYTFDDKYTLSGSYRR 647
                 QG   ++N  L N  T     S  D     SYLS   R  Y + D Y    + R 
Sbjct: 523  FQVSTQG---QNNDRLTNLLTGTRATSWPDSNSAYSYLSFFFRGEYNYKDLYYAEVAART 579

Query: 648  DGSSRFAKDVRWGDFWSVGASWRLDRETFISMPEWVNMLKLRGSYGEVGNDALLNSDGTD 707
            D SSRF  D RWG FWS+G  W +  E F+   EW+   +++ S G  GN  +       
Sbjct: 580  DASSRFGADHRWGMFWSLGFMWNIKNEAFLKDIEWLTSAQVKLSTGTSGNSEI------- 632

Query: 708  RYYGYQELYTLGMNNAKEPGFLQQDVLGSANLLWESNNSFDIGVEFDLFNRVSGSVEYFN 767
             YY +  L +   N   E G +     G+  L WE   + ++GV F L+NRV+ +V++++
Sbjct: 633  PYYDHLALVSGDANYNDEAG-IYPSQSGNEELSWEQTWANNVGVSFGLYNRVNVNVDFYH 691

Query: 768  RESENLLFRVPLPLS-SGVKEKWENIGTMANTGVEVQLSTDAVKTQDFTWNVNLNVSTFK 826
            +++ N+L  VP   + +GV  +W+NIG M N GVE+ +  D ++T+DFTWN++ NVS  K
Sbjct: 692  KKTTNMLMLVPQSYAITGVGNRWDNIGAMMNRGVEIAIDGDVIRTKDFTWNLSANVSYNK 751

Query: 827  NELKKLPQ--EEVITGTK--KYMVGKSIYDYWLRDWYGVDPADGAGLFATDTWVEGKTRV 882
            N+L +L    EE +  T   KY+VG S+ +Y++  + GV+PA+G  L+ T          
Sbjct: 752  NKLLELYNGVEEYVNSTTGLKYVVGHSVREYFMNRYAGVNPANGDALWYT---------- 801

Query: 883  INGDTVTTDSNGAKYHYAGSAIPDFAGGITNTFTYKNLSLSVLLT-----YQVGGKVYDA 937
             +G+  T      K     S    + GG   +  +K LSLS   +     Y +    +  
Sbjct: 802  ADGELTTEFREEDKVMTGKSFDSPWVGGFGTSLMWKGLSLSAQFSWMAKRYVMNNDRFFE 861

Query: 938  NYASLMNAGTQGGALHKDILNRWQQAGDETDVPRMDLTTATHYNAQSDRWLIDASYLNIR 997
                L +A  Q   L   + +RW++ GD TD+PR  +T         DR+L ++S+L ++
Sbjct: 862  ESNGLYSAYNQSKRL---LYDRWKKPGDITDIPRYGVTAQL-----DDRFLENSSFLRLK 913

Query: 998  SVNLNYVLPSELTSKV-FLKNASVFASGENLALFSKRDGMNVNQSYSGVTSNSYIPARVY 1056
            ++ L Y  P  L  K  F  +A V+  G+NL  ++   G++   + + V    Y  +R +
Sbjct: 914  NLTLAYAFPQSLLKKTNFFTSARVYLQGQNLLTWTGFTGLDPEVA-TNVYRAQYPASRQF 972

Query: 1057 TVGLNVT 1063
            T+G++V+
Sbjct: 973  TLGIDVS 979