Pairwise Alignments

Query, 1064 a.a., SusC/RagA family TonB-linked outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 1146 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  396 bits (1017), Expect = e-114
 Identities = 313/1096 (28%), Positives = 516/1096 (47%), Gaps = 111/1096 (10%)

Query: 15   LLQQVYAQSRTVSGTVTDQGTSQGLPGVAVIVKGTTVGTTTGVDGTYSI-NVPANGNTLI 73
            L ++   ++RTV G V D    + + G +V +KG   GT T +DG YS+ NVP +  TL 
Sbjct: 116  LKEESAQRTRTVQGVVVDD-KGEPVIGASVQIKGEGSGTITDMDGRYSLMNVPESA-TLT 173

Query: 74   FRFIGYKTVEREIGSAATINVNLGVDDKQLEEVVVVAYGTADKGSFTGSATQISAEKIAQ 133
              +IGYKTV        T  + L  D K ++EVVVV YG   K   + S + + AE+IA+
Sbjct: 174  ISYIGYKTVSLSAKDKNTAKITLTEDSKMIDEVVVVGYGVQRKRDVSTSISSVKAEQIAE 233

Query: 134  RPVTNITNAIAGQAAGVQTNSGSGQPGAGPEIRIRGIGSINSSNDPLYVVDGTPYPGSIA 193
               ++   A+AG+  GVQ    SG P     IR+RGI ++N+ +DPLY++DG P     A
Sbjct: 234  VSASDFRQALAGKMPGVQVTQPSGDPEGSVSIRVRGISTVNAGSDPLYIIDGVPVERGFA 293

Query: 194  NLNVDDIESISILKDASSTALYGARATNGVVMITTKKGKKGSNQLNVKISQGVSERAIKE 253
            NLN +D+ES+ +LKDASS A+YG+R +NGV++ITTK+G+    ++      G+   + K+
Sbjct: 294  NLNNNDVESVEVLKDASSAAIYGSRGSNGVIIITTKQGQSEKMKVQYDGYYGIQSIS-KK 352

Query: 254  YDRVNAYEYYPLIWEAQRNSLVNAAKDPYSLEDANQIASGLKKLRDGKDGSVKGILGYNP 313
               +NAY++     +   NS +          DAN           G      G+   + 
Sbjct: 353  LPMLNAYQFAEFAKDGHDNSYL----------DANP---------GGSPNDPNGMRPNSW 393

Query: 314  FNVANDAIVDANGNINPEAKLLYDDVDWFEPLQRSGSRSDYALNYSGGSEKSDYFVSLGY 373
              +  +     NG+          D DW + + RS + + + ++ SG  +   YF+S  Y
Sbjct: 394  ERIPTELFPYLNGDQG------LTDTDWQDAIFRSAATTSHNVSISGRGKTVGYFISANY 447

Query: 374  LKEKGYVIRSDYERFTGRVNVNTQATDWLRTGLNVSGTITESNQASTSSSSSYVNPFNFA 433
              ++G +I SD+++++ R+N++ +    L+ GLN S + + SN+   S S+  V     A
Sbjct: 448  YDKEGIIINSDFKKYSMRMNLDGKYKR-LKFGLNFSPSYSTSNRVDASGSNGIVQS---A 503

Query: 434  RGIGPIYPVYAHDPSTGAYLLDEDGNRIYDYGNLSNLGLPNRGSNASVGRHIVAETMWND 493
              + P++PVY  D   G+Y  +  GN  +  GN       +   NA +    VA      
Sbjct: 504  LMMPPVWPVYNSD---GSY--NYQGNGYWRIGN-------DYQHNAVLNP--VAMANLQS 549

Query: 494  NLYNRNVLSARTFGEVKFLQDFKFTTNLSVDIANYLAAEYDNNKV---GDGAPAGRASRT 550
            ++ +R  +  + F E++  +   +  +   D       +Y ++++   G      +++ T
Sbjct: 550  DVVDRMAIVGKVFAELELFKGLTYNISFGGDYYGSHNDQYRSSELPLLGQKYYDIKSNPT 609

Query: 551  STTATTYNINQLL----NYSKTFNDRHFVEALVGHENYSYDYKYMYGMRQGVIVED--NT 604
            + +++ +  N L+    NY+   N+ H + A++        YK        V   D  N 
Sbjct: 610  AYSSSGFYFNWLIENKINYNTVINEDHSINAVLVQSAQKETYK-----GDNVTATDFPND 664

Query: 605  ELGNFTTTNSLDSRTDK--YRVESYLSRLNYTFDDKYTLSGSYRRDGSSRFAKDVRWGDF 662
             +   +    +   +DK  + + SYL+R+ Y++  KY  SG+ R DGSSRF K+ RWG F
Sbjct: 665  YIQTISGGTVIKGASDKTQWSIASYLARVQYSYKGKYMASGAIRADGSSRFGKNNRWGYF 724

Query: 663  WSVGASWRLDRETFISMPE---WVNMLKLRGSYGEVGNDALLNSDGTDRYYGYQELYTLG 719
             S   +WR+  E F +  +   +V+ LK+R SYG  GN  + N D         + Y LG
Sbjct: 725  PSASLAWRVSGEDFFTKAKFLSFVDDLKIRTSYGVTGNFQIGNYDHLSLM--ALDNYILG 782

Query: 720  MNNAKEPGFLQQDVLGSANLLWESNNSFDIGVEFDLFNRVSG-SVEYFNRESENLLFRVP 778
              N +     + + + + +L WE N   ++GV+  +F  + G +V+Y+N  + N+L  VP
Sbjct: 783  TGNGQLVQGYKPNTIKNDDLSWEKNAMVNVGVDLQMFKGLLGITVDYYNTNTSNMLLNVP 842

Query: 779  LPLSSGVKEKWENIGTMANTGVEVQLSTDAVKTQDFTWNVNLNVSTFKNELKKL-PQEEV 837
            +P  +G      NIG + N G E+ L++    T+DF ++ N N +T  NE+K L P    
Sbjct: 843  VPHLTGYSTALMNIGKVNNRGWEIALTSQKNFTKDFGYSFNANYATNTNEVKALGPGNAP 902

Query: 838  ITGTKKY-------MVGKSIYDYWLRDWYGVDPADGAGLFATDTWVEGKTRVIN---GDT 887
            I  T           VG+ I  Y+L            G+F+ +  ++      N   GD 
Sbjct: 903  IISTGSVDHAYYITKVGEPIGCYYL--------LVQDGIFSNEEELKKYPHFSNTQPGDF 954

Query: 888  VTTDSNG-------AKYHYAGSAIPDFAGGITNTFTYKNLSLSVLLTYQVGGKVYDAN-- 938
               D +G             G+ +PDF  G      YK + L        G ++ + N  
Sbjct: 955  RFVDVDGDGVMDLDKDRTIVGNYMPDFTYGFGGKVWYKGIDLDFNFQGVYGNEILNLNRR 1014

Query: 939  YASLMNAGTQGGALHKDILNRWQQAGD--ETDVPRMDLTTATHYNAQSDRW-LIDASYLN 995
            Y   +   T G  +    LNRW+ A +     V R +   +  YN ++  W L D SYL 
Sbjct: 1015 YIDNLEGNTNGTTI---ALNRWKSADNPGNGQVNRAN-RKSKGYNGRTSTWHLEDGSYLR 1070

Query: 996  IRSVNLNYVLPSELTSKVFLKNASVFASGENLALFSKRDGMN-------VNQSYSGVTSN 1048
            +++V L Y LP  LT + F++   V+ SG+NL   +   G N        N    G    
Sbjct: 1071 LQNVTLGYTLPQNLTRRFFVEKLRVYVSGQNLWTSTNYGGYNPEVNARPSNSLSPGEDYG 1130

Query: 1049 SYIPARVYTVGLNVTL 1064
            +Y  A+ +  GLN+TL
Sbjct: 1131 TYPLAKTFLFGLNITL 1146