Pairwise Alignments

Query, 698 a.a., ATP-dependent DNA helicase RecG from Parabacteroides merdae CL09T00C40

Subject, 693 a.a., ATP-dependent DNA helicase (NCBI) from Escherichia coli BW25113

 Score =  428 bits (1100), Expect = e-124
 Identities = 278/681 (40%), Positives = 386/681 (56%), Gaps = 27/681 (3%)

Query: 4   LDKRSIMYLPGVGPKKAEILQKEAGISSYEDMLFYFPYKYIDRSRFYKVAEVTGDMPYIQ 63
           LD   +  L GVG   +  L K   + + +D+L + P +Y DR+  Y + E+   + Y  
Sbjct: 6   LDAVPLSSLTGVGAALSNKLAK-INLHTVQDLLLHLPLRYEDRTHLYPIGELLPGV-YAT 63

Query: 64  MKGRILFFDTVGEGRTRRLIGKFTDGTGTIDLVWFKGINYVLDKIKTGVDYIVFGKPTEF 123
           ++G +L  +    GR R +  + +DG+G + + +F     + + +  G   + +G+    
Sbjct: 64  VEGEVLNCNISFGGR-RMMTCQISDGSGILTMRFFNFSAAMKNSLAAGRRVLAYGEAKRG 122

Query: 124 GHIYNIPHPD--IDPLDQADKVANGLTPFYNTSEKMKKSFLNSRAIQNLQYTLLSGLNWT 181
            +   + HP+  +       ++   LTP Y T+E +K++ L     Q L   LL      
Sbjct: 123 KYGAEMIHPEYRVQGDLSTPELQETLTPVYPTTEGVKQATLRKLTDQALD--LLD--TCA 178

Query: 182 LPETLPPDVLNRIRMMSFPEAIRNVHFPESVDKL-------RKAQLRLKFDELFFIQLNI 234
           + E LPP++     MM+ PEA+R +H P    +L         AQ RL  +EL    L++
Sbjct: 179 IEELLPPELSQG--MMTLPEALRTLHRPPPTLQLSDLETGQHPAQRRLILEELLAHNLSM 236

Query: 235 LRTSNLRKLKLRGIVFP-SVGDYFNTFYKEYLPFELTNAQKRVVREIRADMGSGRQMNRL 293
           L    LR    R    P S  D         LPF+ T AQ RVV EI  DM     M RL
Sbjct: 237 LA---LRAGAQRFHAQPLSANDTLKNKLLAALPFKPTGAQARVVAEIERDMALDVPMMRL 293

Query: 294 LQGDVGSGKTLVALLSMLLAVDNHCQACMMAPTEILATQHYATVMGFLKDMDIKVALLTG 353
           +QGDVGSGKTLVA L+ L A+ +  Q  +MAPTE+LA QH      +   + I+V  L G
Sbjct: 294 VQGDVGSGKTLVAALAALRAIAHGKQVALMAPTELLAEQHANNFRNWFAPLGIEVGWLAG 353

Query: 354 STKKKERNKILPAIASGEIQLVIGTHALIEETVVFSSLGLAIIDEQHRFGVEQRSRLWTK 413
             K K R     AIASG++Q+++GTHA+ +E V F+ L L IIDEQHRFGV QR  LW K
Sbjct: 354 KQKGKARLAQQEAIASGQVQMIVGTHAIFQEQVQFNGLALVIIDEQHRFGVHQRLALWEK 413

Query: 414 N---AVVPHVLVMTATPIPRTLAMTLYGDLDVSVIDELPPGRKPIQTVHRYDNKKAQLYD 470
                  PH L+MTATPIPRTLAMT Y DLD SVIDELPPGR P+ TV   D ++  + D
Sbjct: 414 GQQQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAIPDTRRTDIID 473

Query: 471 FLRKE-IGQGRQVYVVYPLIEGSEKLDYKNLEEGFETFKEVFPEYKVCMVHGKMKAADKE 529
            +    I +GRQ Y V  LIE SE L+ +  E  +E  K   PE  V +VHG+MK A+K+
Sbjct: 474 RVHHACITEGRQAYWVCTLIEESELLEAQAAEATWEELKLALPELNVGLVHGRMKPAEKQ 533

Query: 530 AEMQKFISGEAQILMATTVIEVGVNVPNASVMVIESAERFGLSQLHQLRGRVGRGAEQSY 589
           A M  F  GE  +L+ATTVIEVGV+VPNAS+M+IE+ ER GL+QLHQLRGRVGRGA  S+
Sbjct: 534 AVMASFKQGELHLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGAVASH 593

Query: 590 CVLVSSYKLSNETRKRLEIMVSSNNGFEIAEADLRLRGHGDLEGTRQSGEGIDLKIANLA 649
           CVL+    LS   + RL+++  SN+GF IA+ DL +RG G+L GTRQ+G   + K+A+L 
Sbjct: 594 CVLLYKTPLSKTAQIRLQVLRDSNDGFVIAQKDLEIRGPGELLGTRQTGNA-EFKVADLL 652

Query: 650 ADGQILQYARDIAQDVLNEDP 670
            D  ++   + +A+ +    P
Sbjct: 653 RDQAMIPEVQRLARHIHERYP 673