Pairwise Alignments

Query, 414 a.a., exonuclease SbcCD subunit D from Parabacteroides merdae CL09T00C40

Subject, 413 a.a., exonuclease subunit SbcD from Pseudomonas fluorescens SBW25

 Score =  319 bits (818), Expect = 8e-92
 Identities = 168/411 (40%), Positives = 250/411 (60%), Gaps = 6/411 (1%)

Query: 3   LKIIHTADWHLGQTFFGYDRDEEHEAFLSWLIDILTLRQTDVLLIAGDVFDVANPSAAAQ 62
           +++ HT+DWHLGQ   G +RD EH  FL WL+  L     DVLLIAGD+FD  NP   AQ
Sbjct: 1   MRLFHTSDWHLGQNLHGQERDFEHACFLEWLLGQLNAHSPDVLLIAGDIFDTVNPPLKAQ 60

Query: 63  RRFFRFLREANRRNPQLQIVIIAGNHDSAARLEAPIPLLEELNTSIVGAVPRTDLCKIDF 122
            R + F+  A+ +NP+L IV+IAGNHDS +R+E P PL+  L T  +G V   D  ++D 
Sbjct: 61  ERLYDFIISAHEQNPKLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVLWLDDGELDA 120

Query: 123 DSLLIPLYNKEGKREAICLAVPYLRQGDYPASKEGKDTYVEGVTRMYRQLYDYADSQRQP 182
           + LLIPL + +GK  A CLA+P+LR  +   +  G D Y+ G+ +++  L   A+++R+ 
Sbjct: 121 ERLLIPLPDAKGKVAAWCLALPFLRPAEVTGAHLG-DDYLRGIGQVHEWLIAAANAKRKK 179

Query: 183 GEALFAMGHLHATGAELSEDDRSERT-IMGGLESISVEAFNEDLAYTALGHIHKAQRVGG 241
           G+AL A+ H H  G  +SED  SER+ I+G  E++    F+  +AY ALGH+HK Q+V G
Sbjct: 180 GQALIAISHAHMAGGSVSED--SERSLIIGNAEALPASLFDRSVAYVALGHLHKPQKVNG 237

Query: 242 RESVRYAGSPLPMSFSEQHYHHQVVAFTLENGCLSDLEAVPIPLRTALHRIPAEPASPAE 301
            E +RY+GSP+P+SFSE  Y HQ++  T +  CL  +E + IP    L R+ A P   A+
Sbjct: 238 EERIRYSGSPIPLSFSEIGYKHQILDVTFQGQCLVSVEPLLIPRSVDLQRLEAAPL--AD 295

Query: 302 VLLSLSNLPLAEEGADRSLWPYLEVQVLLTEPDPGFRHRVEEALADKAVRLTSIIPSYPK 361
           +L +L+ LP  +  A+    P+LEV+V L EP P  R ++E AL  KAVRL  I   Y  
Sbjct: 296 ILKALAELPDVDLLAETQRHPWLEVRVRLDEPQPDLRQQIETALQGKAVRLVRIAAEYAG 355

Query: 362 KEGEEDSRPFSYTDLQKIAPLDMLRHTFTNRFGGDLPEELEKMFNDVMREV 412
           K G +D+      +L ++ P ++    + + +G ++ E+  K F  +++EV
Sbjct: 356 KRGSDDTCEERLIELDQLTPQELFSRAWQDSYGSEVDEQTLKDFAVLLQEV 406