Pairwise Alignments

Query, 1075 a.a., UvrD-helicase domain-containing protein from Parabacteroides merdae CL09T00C40

Subject, 1180 a.a., DNA helicase/exodeoxyribonuclease V, beta subunit (EC 3.1.11.5) from Enterobacter asburiae PDN3

 Score = 58.5 bits (140), Expect = 3e-12
 Identities = 104/462 (22%), Positives = 178/462 (38%), Gaps = 81/462 (17%)

Query: 337 LTDVSRQIAAYREEKNVMLIADTTELLSKVIEGSDAPFIYEKTGTHVDHYMIDEFQDTSG 396
           +T++   +A  +  +  +   D    L   +   +   +     T     MIDEFQDT  
Sbjct: 332 MTEIRDAVAREKRRRGELGFDDMLSRLDAALCSENGEALAAAIRTRFPVAMIDEFQDTDP 391

Query: 397 MQWNNFRPLIEESLAHSRDNLIVGDVKQSIYRFRNSDWKLLDEQVQADFSPEVVHEETLK 456
            Q+  FR +  +    +   L++GD KQ+IY FR +D   +   ++A    EV    TL 
Sbjct: 392 QQYRIFRRIWRQQPGTAL--LLIGDPKQAIYAFRGAD---IFTYMKA--RSEVDAHYTLD 444

Query: 457 DNWRSCRNIVEFNNALFTTLPGVLQ-----------AVYNEALSVSSLSEEQRAAFFTKI 505
            NWRS   +VE  NALF+ +                A  N +L      E Q A  F  +
Sbjct: 445 TNWRSSPGMVESVNALFSRMDTAFMFREIPFQPVKFAEKNASLRFEFNGETQPAMNFWLL 504

Query: 506 ------MSAYDKSFQQVPPPFMQKDGHVRIEFLSGDNEKD--WKEEALGRLPGVLEKLQD 557
                 ++ Y  +  Q           +R    +G + K   WK    G  P  ++    
Sbjct: 505 DGEGYGVADYQNAMAQ------HCAAQIRDWLSAGAHGKALLWK----GDKPAPVK---- 550

Query: 558 NGYALKDIAILVRTNQEGAQVAD--TLLAYKEEHPSNRYNYDIISDEALFVSGSTAVRFM 615
                 DI +LVR+ QE A + D  TLL     + SNR +          V  +   + M
Sbjct: 551 ----ASDITVLVRSRQEAALIRDALTLLNIPSVYLSNRDS----------VFETLEAQEM 596

Query: 616 VSLLRYLKNPEDRTNEQIALYSYQVLKGRFGVET--------PAFPPEVVSVLQILSRQS 667
           + LL+ +  PE  +  + AL S  +      ++          A   E V   +   ++ 
Sbjct: 597 LWLLQAVLAPERESTLRSALASAMLGLNARDIDALNNDEAAWDAVVEEFVRYREKWQKRG 656

Query: 668 LYEITEGLF-------RLFADDFPENEQVFVQAFLDMVSEY-TQKESADLNRFLKWW--- 716
           +  +   L         + A    E     +    +++ E  TQ ES   +  ++W    
Sbjct: 657 VMAMVRELMAQRHIAENMLATAGGERRLTDILHISELLQEAGTQLESE--HALVRWLAQQ 714

Query: 717 ----DETGCRKTIATPDRQNAIRILTVHKSKGLGFKVVIIPF 754
               +     + +     ++ ++I+T+HKSKGL + +V +PF
Sbjct: 715 IADPNSNSSSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPF 756



 Score = 47.8 bits (112), Expect = 5e-09
 Identities = 39/124 (31%), Positives = 55/124 (44%), Gaps = 8/124 (6%)

Query: 7   ASAGAGKTHKLTGEYLTLL--------FTGPGAFRRILAVTFTNKATDEMKTRIVDELYN 58
           ASAG GKT  +   YL LL        F  P +   +L VTFT  AT E++ RI   ++ 
Sbjct: 23  ASAGTGKTFTIAALYLRLLLGLGGNAAFPRPLSVEELLVVTFTEAATAELRGRIRSNIHE 82

Query: 59  LASGRKSDYVELLKSAYSLTEIQVRKQAAQILIDILHDYSAFNISTIDRFFQQTMRAFTR 118
           L         +    A  L EI  ++QAAQ L+         ++ TI  F Q+ +     
Sbjct: 83  LRIACLRQSTDNPLYASLLEEIADKQQAAQWLLLAERQMDEASVFTIHGFCQRMLSLNAF 142

Query: 119 EIGL 122
           E G+
Sbjct: 143 ESGM 146