Pairwise Alignments

Query, 593 a.a., 3-hydroxy-3isohexenylglutaryl-CoA:acetate lyase from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 451 a.a., ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

 Score =  274 bits (701), Expect = 5e-78
 Identities = 169/446 (37%), Positives = 237/446 (53%), Gaps = 14/446 (3%)

Query: 6   LRIGSASGFWGDSEFAAAQLVQRGNIDVLVFDYLAEITMSLLSRAKAKDPAQGYAPDFVT 65
           +RIG+ +G+ GD    AA+L +RG +D L+F+ LAE T+++  +A+  DP +GY P    
Sbjct: 9   VRIGAGAGYSGDRIEPAAELAERGELDYLIFECLAERTIAIGQQARLADPTKGYDPLLAE 68

Query: 66  TLQPLMKELKSRGIKVIANAGGVNPSACRAALVAAAQAEGV-DLNIAAVLGDDLMPQVEA 124
            +  ++K    +G+++I N G  NP+A    +   A+  G+  L +AAV GDD++  V+ 
Sbjct: 69  RMHAVLKTCADKGVRIITNMGAANPAAAAQRVREIARTLGLAHLKVAAVTGDDVLQAVQE 128

Query: 125 LRSANTQEMFAGSPFPQKVMSANAYLGAFPIAAALDAGADVVVTGRCVDSAVTLAPLIHA 184
                       S   ++++SANAYLG  PI  AL AGADV++TGR  D A+ LAPL+H 
Sbjct: 129 GDFRIEDNGQPVSSLGERLISANAYLGVAPILEALQAGADVIITGRVADPALVLAPLVHE 188

Query: 185 FGWTAADHDLLAQGSLAGHLIECGTQATGGNYTD--WDSVPGWDDMGFPIAECRADGSFV 242
           FGW A D D L QG+L GHL+EC  Q TGG + D     V G   +GFPI E  ADGS V
Sbjct: 189 FGWAADDWDKLGQGTLVGHLLECAGQITGGYFADPGKKDVAGLARLGFPIGEVSADGSAV 248

Query: 243 ITKPEGTGGLVCHSTVGEQMLYEIGDPRAYILPDVVCDFTSVTLTQIGPDRVEVKGARGL 302
           ITK  G+GG V   T  EQ+LYEI DP AY  PDVV DF+ V +T+IGPDRV V G RG 
Sbjct: 249 ITKVAGSGGQVTAQTCKEQLLYEIHDPSAYYTPDVVADFSQVQITEIGPDRVAVSGGRGR 308

Query: 303 PPTDQAKVSVTYADGFRAMSLFMIGGINAGAKGQRVGAAMLARMRRHYAQRGWPDFTETC 362
                 K ++ Y D F        G I+    G +  A + A + R        +  E  
Sbjct: 309 ARPATLKTTLGYRDSFIGE-----GQISYAGPGAQARAQLAAEIVRERLALTGVETDELR 363

Query: 363 VEAIGAEDTYGPH---ARPDAREVMLKVGVRHPVKDALELFSREVAPMALMSAPAITGFT 419
           ++ IG     GP      P+  EV L+V  R            EV  +   + PA  G  
Sbjct: 364 LDLIGMNAIAGPQMSAGAPEPYEVRLRVSGRTASMQQAVRIGNEVETL-YTNGPA--GGG 420

Query: 420 GGRPKVQPVVRLFSCLIPKTQLAASI 445
           G     + V+ + S L+P++ +  S+
Sbjct: 421 GATKSAREVIAVLSLLLPRSLVHPSV 446