Pairwise Alignments

Query, 540 a.a., DNA repair protein RecN from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 553 a.a., DNA repair protein RecN (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  285 bits (729), Expect = 3e-81
 Identities = 203/551 (36%), Positives = 288/551 (52%), Gaps = 20/551 (3%)

Query: 1   LRDFVIVQSLELELGSGFGVLTGETGAGKSILIDALQLALGSRSDSGVVREGAARCDIAA 60
           +RD +I+  L L+  +G  VLTGETGAGKSIL+DAL   LG R  + +VR+GAA+ ++ A
Sbjct: 7   IRDILIIDHLVLDFRAGLNVLTGETGAGKSILLDALGFVLGWRGRADLVRQGAAQGEVTA 66

Query: 61  EFDAPASLTPW--LEEQGFPVEDGLLLRRTVDT-EGRSRAWINGSAATVTQLKALADGLV 117
            FD       +  L   GFP  +G L+ R V+T EGR  A++N  A + T L+AL+D LV
Sbjct: 67  VFDLAPDHPAFAVLRAAGFPDPEGELILRRVNTGEGRKSAYVNDRACSGTVLRALSDVLV 126

Query: 118 DIHGQHAWQSLTRAEAVRDLLDAYAGIDTA--PAARAWAQWRQRRKALDSATEKQNSLQQ 175
           ++HGQ   + L   +  R LLD + G D      A AW      + AL++A  +  ++  
Sbjct: 127 ELHGQQDDRGLLDPKGHRALLDDFGGHDRLRREVASAWRARAAAQSALETARAEVAAVAA 186

Query: 176 ESERLAWQIAELDKLSPQAGEWEELNTQHSRLANAQGLLDAAQIAANALDEDDTNAAALI 235
           + E L   + ELD L PQ GE  EL+    R+  A+ +      A  AL   D  A +L+
Sbjct: 187 DEEFLRHAVGELDALDPQPGEEAELDIARRRMQAAEKIRADVARALQALIAPDGGAESLV 246

Query: 236 HRALSALQAQAHIEPQFASAIEALEAALAQVQDTVHSLHQYSRHTER-------DPGSLE 288
             A   L+  A      A A  AL+A +  +   +  L + S  TER       DP  LE
Sbjct: 247 VDATRWLEGVA------AEADGALDAPIGALSRALVELGEASDGTERALDGLGVDPLELE 300

Query: 289 ALDQRLSLWVSLARRYRRTPEELAEVHAQWKTELAQIDQALD-LEALQRAERADWKTFAT 347
             ++RL     LAR++    ++L       +  L  +D   D L+ L++A       +A 
Sbjct: 301 RTEERLFALRGLARKHGVAADDLGGFADTLRARLNTLDAGADRLQGLEQALAEAEAAYAA 360

Query: 348 ALQAISKERQKAAPKLSKAVTATMQTLGMQGGVFEVALLPLEEPQAHGAEQVEFRVAGHA 407
           A  A++  R+ AA +L  A+   +  L M+  VF   + P   P   GA+QV FRVA + 
Sbjct: 361 AAGALTAARRAAAGRLDAAMADELAPLKMERAVFGTEITPAA-PGPDGADQVTFRVATNP 419

Query: 408 GATPKPVGKVASGGELSRIALAISVVTSRLGQAPTLIFDEVDSGIGGAVAHTVGQLLRQL 467
           GA    + K+ASGGELSR  LA+ V  +   +  TLIFDE+D G+GGA A  VG+ L+ L
Sbjct: 420 GAPAGALNKIASGGELSRFLLALKVCLTAGTEGLTLIFDEIDRGVGGATADAVGRRLQSL 479

Query: 468 GKDRQVLAVTHLPQVAACADHHLLVSKQAVGRQTQSTVEPIATDARVRELARMLGGGEQS 527
            +  QVL VTH PQVAA   HH  V K      T S V P+A   RV E+ARM+ G   +
Sbjct: 480 AEAGQVLVVTHSPQVAALGAHHWRVEKTVQADVTLSRVVPLAPPDRVDEIARMMSGDVVT 539

Query: 528 EISLAHAREML 538
           + + A AR +L
Sbjct: 540 DAARAAARALL 550