Pairwise Alignments

Query, 540 a.a., DNA repair protein RecN from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 555 a.a., DNA repair protein recN (Recombination protein N) (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  259 bits (663), Expect = 1e-73
 Identities = 162/549 (29%), Positives = 295/549 (53%), Gaps = 13/549 (2%)

Query: 1   LRDFVIVQSLELELGSGFGVLTGETGAGKSILIDALQLALGSRSDSGVVREGAARCDIAA 60
           ++++ +++ L++   +GF V+TGETGAGKSI++ A+ L LG R+D   +R GA++C I A
Sbjct: 7   IQNYALIEKLDIGFETGFSVITGETGAGKSIILGAIGLLLGQRADVKAIRRGASKCIIEA 66

Query: 61  EFDAPA-SLTPWLEEQGFPVEDG-LLLRRTVDTEGRSRAWINGSAATVTQLKALADGLVD 118
            FD  A  + P+ EE     +D   +LRR V   G+SRA+IN + A++ Q+K L + L+D
Sbjct: 67  RFDISAYGMRPFFEENELEYDDEECILRREVQASGKSRAFINDTPASLAQVKELGEQLID 126

Query: 119 IHGQHAWQSLTRAEAVRDLLDAYAGIDTAPAAR--AWAQWRQRRKALDSATEKQNSLQQE 176
           +H QH    L +     ++LD  A  D A       + +W+   + L   T      + +
Sbjct: 127 VHSQHQNLLLNKEGFQLNVLDILAHNDDALEKYHLLYNEWKLLDRELSELTALAEQSRTD 186

Query: 177 SERLAWQIAELDKLSPQAGEWEELNTQHSRLANAQGLLDAAQIAANALDEDDTNAAALIH 236
            + L +Q+ +L++     GE  EL  +   L++A+ +         +   D+    + + 
Sbjct: 187 EDYLRFQLEQLEEAHLVEGEQSELEQEAETLSHAEEIKAGLYRIEQSFFSDEGGLLSFLK 246

Query: 237 RALSALQAQAHIEPQFASAIEALEAALAQVQDTVHSLHQYSRHTERDPGSLEALDQRLSL 296
             L+ L     +        + +E+A  +++D    +       E +P  L+ ++ RL+L
Sbjct: 247 DNLNTLNNLRKVYQPAGELSDRMESAYIELKDISQEVSAQGESIEFNPTRLDEVNDRLNL 306

Query: 297 WVSLARRYR-RTPEELAEVHAQWKTELAQI----DQALDLEALQRAERADWKTFATALQA 351
             SL +++R +T EEL  +  Q++++L++I    D+  +L A + A+    K  AT L  
Sbjct: 307 IYSLQQKHRVQTLEELMALADQYRSKLSEITSYDDRIAELTARKEAQYERVKKQATVL-- 364

Query: 352 ISKERQKAAPKLSKAVTATMQTLGMQGGVFEVALLPLEEPQAHGAEQVEFRVAGHAGATP 411
            +K R  AA ++ K +   +  LGM    F+V +   +EP   G + V F  + +   T 
Sbjct: 365 -TKARAAAAREVEKQLAERLVPLGMPNVRFQVEMGLKKEPGIQGEDTVNFLFSANKNGTL 423

Query: 412 KPVGKVASGGELSRIALAISVVTSRLGQAPTLIFDEVDSGIGGAVAHTVGQLLRQLGK-D 470
           + +  VASGGE++R+ L+I  + +   + PT++FDE+D+G+ G +A  +  +++++G  +
Sbjct: 424 QSISSVASGGEIARVMLSIKAMIAGAVKLPTIVFDEIDTGVSGEIADRMADMMQEMGDCN 483

Query: 471 RQVLAVTHLPQVAACADHHLLVSKQAVGRQTQSTVEPIATDARVRELARMLGGGEQSEIS 530
           RQV+++THLPQ+AA    H  V K+    +T S +  +  + RV E+A ML G   +E +
Sbjct: 484 RQVISITHLPQIAARGRAHYKVYKKDSDTETNSHIRRLTDEERVEEIAHMLSGATLTEAA 543

Query: 531 LAHAREMLA 539
           L++A+ +LA
Sbjct: 544 LSNAKALLA 552