Pairwise Alignments

Query, 307 a.a., Hypothetical ATP-binding protein UPF0042, contains P-loop from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 282 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  228 bits (582), Expect = 1e-64
 Identities = 128/285 (44%), Positives = 189/285 (66%), Gaps = 12/285 (4%)

Query: 11  LVLITGMSGSGKTVALTALEDVGFYCVDNLPPELLESFIDLEQSNRAARVAIAMDVRSAA 70
           LVL++G SGSGK+VAL  LED+G+YCVDNLP +++ES ++ +   R+  VAI++DVR+  
Sbjct: 3   LVLVSGRSGSGKSVALRVLEDLGYYCVDNLPLQMMESLLE-QLKGRSDLVAISVDVRN-- 59

Query: 71  ALPGLPRRLAQLQRRAHRPVHLTTVFLDATTDTLVRRFSETRRLHPLSLKRSQDQHRALT 130
            +P    +L +   +  +   + + FL+++ + L++R+SETRRLHPLS  +      +L 
Sbjct: 60  -MPSEEIQLEKQLAKLPKDTEILSFFLNSSDNVLLKRYSETRRLHPLSRSKV-----SLK 113

Query: 131 DAIEHERELLAELREQA-LVLDTSLIRPTRLRSQIKD-LLGTTQAPLTLVFESFAFKRGI 188
           +AI+ E +LL  + +     +DTS +    L  ++++ LLGT    L + FESF FK G+
Sbjct: 114 EAIQLEGKLLDPIAKLVDHYIDTSNLNIYELSDKVREILLGTVDKELVINFESFGFKYGM 173

Query: 189 PMDADFVFDVRMLPNPHYEPELKPLSGLDAPVATYLAAQPEVVQMEEQITAFLRHWLPQM 248
           P +ADF+FDVR LPNPH+E EL+PL+GLD PV  +L+ QP V +   QI   L  WLP +
Sbjct: 174 PTEADFMFDVRFLPNPHWETELRPLTGLDEPVQQFLSQQPLVNKFIWQIENLLETWLPHL 233

Query: 249 LRDHRSYVTVAIGCTGGQHRSVYLVERLADTFAPDWF-TRVRHRE 292
            R++RSY+T+AIGCTGGQHRSVY+ ++LA  F       + RHRE
Sbjct: 234 ERNNRSYLTIAIGCTGGQHRSVYVTDQLAKLFNKGKHKVQARHRE 278