Pairwise Alignments

Query, 204 a.a., Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 184 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score = 59.7 bits (143), Expect = 3e-14
 Identities = 44/132 (33%), Positives = 64/132 (48%), Gaps = 4/132 (3%)

Query: 38  GLRPTPSRVRETLFNWLGQDLSGWRCIDAFAGTGALGLEAASRGAVEVVLVEQDSALLAN 97
           G RPTPSRVR  +FN     +   R +D  AG+GA+G EA  RGA  V  +EQ +     
Sbjct: 18  GTRPTPSRVRNAIFNVWQFAVPDCRWLDLCAGSGAMGGEALLRGASVVWGIEQSAQACRA 77

Query: 98  LGRITTQLKATG--VRVERGDGVAALRQRAGQGLDAVFLDPPFGDGQNEALYAAALAAAR 155
           + +   +L+A    VR+ +G+    L        D ++ DPP+     E +   AL A R
Sbjct: 78  IAQNWQKLQAPDQEVRLLKGEICRLLASLDAPAFDLIYFDPPYDGDLYEPV--LALLAER 135

Query: 156 QAVRGDGLIYLE 167
             +   G I +E
Sbjct: 136 SLLHEQGEIAVE 147