Pairwise Alignments

Query, 204 a.a., Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 184 a.a., ribosomal RNA small subunit methyltransferase D from Phaeobacter inhibens DSM 17395

 Score = 81.6 bits (200), Expect = 8e-21
 Identities = 72/192 (37%), Positives = 91/192 (47%), Gaps = 24/192 (12%)

Query: 19  VRIIGGQWKRTKLPVADRPG----LRPTPSRVRETLFNWLGQ--DLSGWRCIDAFAGTGA 72
           +RII G ++   L    +      LRPT  RVRE+LFN L    D  G R +D FAGTGA
Sbjct: 1   MRIIAGDFRGRALTSVGKGDAGAHLRPTTDRVRESLFNVLSHLVDFDGLRVLDLFAGTGA 60

Query: 73  LGLEAASRGAVEVVLVEQDSALLANLGRITTQLKATGV----RVERGDGVAALRQRAGQG 128
           LGLEA SRGA E V V+       + G IT  +    +    R+ R D    L    G  
Sbjct: 61  LGLEALSRGAAEAVFVDDGR---VSQGLITKNIDLLRIKDRARLIRRD-ATRLPVNEGAP 116

Query: 129 LDAVFLDPPFGDGQNEALYAAALAAARQAVRGDGLIYLEAPRVWSEDELAQ--IGLQVHR 186
            D +FLDPP+G    ++L   ALAAA +     G +  +A  VW E    Q   G  +H 
Sbjct: 117 CDVIFLDPPYG----KSLGQKALAAATKG----GWLAEDALVVWEESSPMQPPEGFTLHD 168

Query: 187 QGKAGAVAFHLL 198
             K G     LL
Sbjct: 169 SRKYGDTHVTLL 180