Pairwise Alignments

Query, 204 a.a., Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 177 a.a., putative methyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 62.4 bits (150), Expect = 5e-15
 Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 6/152 (3%)

Query: 19  VRIIGGQWKRTKLPVADRPGLRPTPSRVRETLFNWLGQDLS---GWRCIDAFAGTGALGL 75
           +R+I G +KR +  V      RPT    +E LFN L   +    G   +D FAGTG++ +
Sbjct: 1   MRVISGIYKRRRFDVPRTFKARPTTDFAKENLFNVLNNYIDFEEGVTALDLFAGTGSISI 60

Query: 76  EAASRGAVEVVLVEQDSALLANLGRITTQLKATGVRVERGDGVAALRQRAGQGLDAVFLD 135
           E  SRG   V+ VE+D A  + + +I  +++       RGD V        +  D +F D
Sbjct: 61  ELVSRGCDRVISVEKDPAHHSFICKIMKEVQTDKCLPIRGD-VFKFINSGREQFDFIFAD 119

Query: 136 PPFGDGQNEALYAAALAAARQAVRGDGLIYLE 167
           PP+   + E++    L      ++  GL  LE
Sbjct: 120 PPYALKELESI--PELIFKNNLLKEGGLFVLE 149