Pairwise Alignments

Query, 534 a.a., Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 500 a.a., lysyl-tRNA synthetase (RefSeq) from Shewanella amazonensis SB2B

 Score =  493 bits (1268), Expect = e-144
 Identities = 262/508 (51%), Positives = 344/508 (67%), Gaps = 25/508 (4%)

Query: 32  DDNQLIAERREKLKALREAQKQGQGVAFPNDFKPVDKAADLFARYGETTKEALEAEPVRA 91
           D+N+LIAERR KL+ +R   K       PN F+   KAA+L A++G+ TKE LEA   + 
Sbjct: 7   DENKLIAERRAKLEHVR---KNCPANGHPNTFRRKHKAAELQAQFGDKTKEELEALGFQT 63

Query: 92  SVAGRMMLKRVMGKASFATLQDASFGPSGGRIQIYVNNDGVGEAQHGAFKHWDLGDIIAV 151
           ++AGR+M KR      F  LQD S     GRIQ Y +  GV       +   D+GDII V
Sbjct: 64  AIAGRVMAKR----GPFLVLQDVS-----GRIQAYADK-GVQADLKDRYAGLDIGDIIGV 113

Query: 152 EGVLMRTRTGELTIQADRIRLITKSLRPLPDKFHGIADQEIKYRQRYVDLMTDETARRRF 211
           EG L  +  G+L +  +R  L+TK+LRPLP+KFHG+ DQE +YRQRYVDL+ +E +R  F
Sbjct: 114 EGTLHLSGKGDLYVNMERYELLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEDSREAF 173

Query: 212 VARSQALASIRDFMVSHGFLEVETPMLHPIPGGANAKPFKTHHNALDQEMFLRIAPELYL 271
             RS+ +A+IR+FM+   F+EVETPM+H IPGGA+A+PF THHNALD EM+LRIAPELYL
Sbjct: 174 KMRSKVVAAIRNFMIKKEFMEVETPMMHVIPGGASARPFVTHHNALDIEMYLRIAPELYL 233

Query: 272 KRLLVGGFDRVFEINRNFRNEGISVRHNPEFTMMEFYAAYWNYQDLMDFNEQLIRHVVRQ 331
           KRL+VGGF+RVFEINRNFRNEG+S RHNPEFTMMEFY AY +Y+DL+D  E+++  + ++
Sbjct: 234 KRLVVGGFERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLIDLTEEMLSSIAKE 293

Query: 332 VRGDEPLTYQGQPVDILSPFERLTIREAIVKYTDAG--------DSVDDAAWLQAQLKKL 383
           + GD  L Y    +D   P+ R+++ EAI  Y            + V +  +++   K +
Sbjct: 294 LLGDTKLPYGEHVIDFGGPYTRMSMLEAIKHYNPDNATIQAMTYEEVKNIDFMRKLAKDV 353

Query: 384 GLSEEKHQLSGRSLPSLQVLYFEEKVEDKLWNPTFIMDHPTEISPLARANDANPAVTERF 443
           G+  E     G+ L  +    F E  E KL  PTFI  +P +ISPLAR +D N  +T+RF
Sbjct: 354 GIETETFWSCGQLLEEI----FGETAEPKLMQPTFITGYPADISPLARRSDGNDFITDRF 409

Query: 444 ELYITGREFGNAFSELNDAEDQAARFQAQASAKDGGDEEAMYYDADYIRALEYGMPPAGG 503
           E +I GRE  N FSELNDAEDQ  RF+AQ  AKD GD+EAM+YDAD+I ALE+G+PP  G
Sbjct: 410 EFFIGGREVANGFSELNDAEDQDNRFKAQVEAKDAGDDEAMFYDADFITALEHGLPPTAG 469

Query: 504 CGIGIDRLMMLLTDSPSIRDVILFPALR 531
            GIGIDRL+ML T++ +IRDVILFPA+R
Sbjct: 470 QGIGIDRLVMLFTNTHTIRDVILFPAMR 497